External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G53830:CDS:1 | 205 | Chr3: 19940814-19941018 | Arabidopsis thaliana |
AT3G53830:CDS:2 | 74 | Chr3: 19941119-19941192 | Arabidopsis thaliana |
AT3G53830:CDS:3 | 85 | Chr3: 19941299-19941383 | Arabidopsis thaliana |
AT3G53830:CDS:4 | 90 | Chr3: 19941511-19941600 | Arabidopsis thaliana |
AT3G53830:CDS:6 | 237 | Chr3: 19941685-19941921 | Arabidopsis thaliana |
AT3G53830:CDS:7 | 243 | Chr3: 19942022-19942264 | Arabidopsis thaliana |
AT3G53830:CDS:8 | 44 | Chr3: 19942417-19942460 | Arabidopsis thaliana |
AT3G53830:CDS:9 | 183 | Chr3: 19942573-19942755 | Arabidopsis thaliana |
AT3G53830:CDS:10 | 91 | Chr3: 19942853-19942943 | Arabidopsis thaliana |
AT3G53830:CDS:11 | 23 | Chr3: 19943017-19943039 | Arabidopsis thaliana |
AT3G53830:CDS:1.1 | 205 | Chr3: 19940814-19941018 | Arabidopsis thaliana |
AT3G53830:CDS:2.1 | 74 | Chr3: 19941119-19941192 | Arabidopsis thaliana |
AT3G53830:CDS:3.1 | 85 | Chr3: 19941299-19941383 | Arabidopsis thaliana |
AT3G53830:CDS:4.1 | 90 | Chr3: 19941511-19941600 | Arabidopsis thaliana |
AT3G53830:CDS:6.1 | 237 | Chr3: 19941685-19941921 | Arabidopsis thaliana |
AT3G53830:CDS:7.1 | 243 | Chr3: 19942022-19942264 | Arabidopsis thaliana |
AT3G53830:CDS:8.1 | 44 | Chr3: 19942417-19942460 | Arabidopsis thaliana |
AT3G53830:CDS:9.1 | 183 | Chr3: 19942573-19942755 | Arabidopsis thaliana |
AT3G53830:CDS:10.1 | 91 | Chr3: 19942853-19942943 | Arabidopsis thaliana |
AT3G53830:CDS:12 | 44 | Chr3: 19943310-19943353 | Arabidopsis thaliana |
AT3G53830:CDS:13 | 123 | Chr3: 19943470-19943592 | Arabidopsis thaliana |
AT3G53830:CDS:1.2 | 205 | Chr3: 19940814-19941018 | Arabidopsis thaliana |
AT3G53830:CDS:2.2 | 74 | Chr3: 19941119-19941192 | Arabidopsis thaliana |
AT3G53830:CDS:3.2 | 85 | Chr3: 19941299-19941383 | Arabidopsis thaliana |
AT3G53830:CDS:5 | 411 | Chr3: 19941511-19941921 | Arabidopsis thaliana |
AT3G53830:CDS:7.2 | 243 | Chr3: 19942022-19942264 | Arabidopsis thaliana |
AT3G53830:CDS:8.2 | 44 | Chr3: 19942417-19942460 | Arabidopsis thaliana |
AT3G53830:CDS:9.2 | 183 | Chr3: 19942573-19942755 | Arabidopsis thaliana |
AT3G53830:CDS:10.2 | 91 | Chr3: 19942853-19942943 | Arabidopsis thaliana |
AT3G53830:CDS:11.1 | 23 | Chr3: 19943017-19943039 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G53830:exon:5 | 90 | Chr3: 19941511-19941600 | Arabidopsis thaliana |
AT3G53830:exon:7 | 237 | Chr3: 19941685-19941921 | Arabidopsis thaliana |
AT3G53830:exon:1 | 520 | Chr3: 19940499-19941018 | Arabidopsis thaliana |
AT3G53830:exon:12 | 61 | Chr3: 19943017-19943077 | Arabidopsis thaliana |
AT3G53830:exon:15 | 416 | Chr3: 19943470-19943885 | Arabidopsis thaliana |
AT3G53830:exon:2 | 455 | Chr3: 19940564-19941018 | Arabidopsis thaliana |
AT3G53830:exon:3 | 74 | Chr3: 19941119-19941192 | Arabidopsis thaliana |
AT3G53830:exon:4 | 85 | Chr3: 19941299-19941383 | Arabidopsis thaliana |
AT3G53830:exon:6 | 411 | Chr3: 19941511-19941921 | Arabidopsis thaliana |
AT3G53830:exon:8 | 243 | Chr3: 19942022-19942264 | Arabidopsis thaliana |
AT3G53830:exon:9 | 44 | Chr3: 19942417-19942460 | Arabidopsis thaliana |
AT3G53830:exon:10 | 183 | Chr3: 19942573-19942755 | Arabidopsis thaliana |
AT3G53830:exon:11 | 91 | Chr3: 19942853-19942943 | Arabidopsis thaliana |
AT3G53830:exon:13 | 44 | Chr3: 19943310-19943353 | Arabidopsis thaliana |
AT3G53830:exon:14 | 388 | Chr3: 19943470-19943857 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G53830:five_prime_UTR:1 | 315 | Chr3: 19940499-19940813 | Arabidopsis thaliana |
AT3G53830:five_prime_UTR:2 | 250 | Chr3: 19940564-19940813 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G53830.1 | 2088 | Chr3: 19940499-19943885 |
AT3G53830.3 | 2027 | Chr3: 19940499-19943885 |
AT3G53830.2 | 2172 | Chr3: 19940499-19943885 |
AT3G53830.4 | 2018 | Chr3: 19940564-19943857 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G53830:three_prime_UTR:5 | 293 | Chr3: 19943593-19943885 | Arabidopsis thaliana |
AT3G53830:three_prime_UTR:1 | 38 | Chr3: 19943040-19943077 | Arabidopsis thaliana |
AT3G53830:three_prime_UTR:2 | 44 | Chr3: 19943310-19943353 | Arabidopsis thaliana |
AT3G53830:three_prime_UTR:3 | 416 | Chr3: 19943470-19943885 | Arabidopsis thaliana |
AT3G53830:three_prime_UTR:4 | 265 | Chr3: 19943593-19943857 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...