help  | faq  | software  | BAR

Gene : AT3G52270 A. thaliana

DB identifier  ? AT3G52270 Secondary Identifier  ? locus:2100554
Brief Description  Transcription initiation factor IIF, beta subunit
TAIR Computational Description  Transcription initiation factor IIF, beta subunit;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Transcription initiation factor IIF, beta subunit

0 Gene Rifs

1 Organism

4 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1962  
Location: Chr3:19386983-19388944 reverse strand

Gene models - AT3G52270 AT3G52270

? Gene models

Transcripts: 2  Exons: 11  Introns: 9 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
F4J6V5_ARATH similarity Belongs to the TFIIF beta subunit family.

2 Proteins

Function

Gene Ontology

cellular component
transcription factor TFIIF complex  ? ECO  
molecular function
DNA binding  ? ECO  
biological process
transcription initiation at RNA polymerase II promoter  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets