External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G52170:CDS:6 | 106 | Chr3: 19347039-19347144 | Arabidopsis thaliana |
AT3G52170:CDS:5 | 170 | Chr3: 19347244-19347413 | Arabidopsis thaliana |
AT3G52170:CDS:3 | 1090 | Chr3: 19347792-19348881 | Arabidopsis thaliana |
AT3G52170:CDS:1 | 134 | Chr3: 19348966-19349099 | Arabidopsis thaliana |
AT3G52170:CDS:6.1 | 106 | Chr3: 19347039-19347144 | Arabidopsis thaliana |
AT3G52170:CDS:5.1 | 170 | Chr3: 19347244-19347413 | Arabidopsis thaliana |
AT3G52170:CDS:3.1 | 1090 | Chr3: 19347792-19348881 | Arabidopsis thaliana |
AT3G52170:CDS:1.1 | 134 | Chr3: 19348966-19349099 | Arabidopsis thaliana |
AT3G52170:CDS:6.2 | 106 | Chr3: 19347039-19347144 | Arabidopsis thaliana |
AT3G52170:CDS:5.2 | 170 | Chr3: 19347244-19347413 | Arabidopsis thaliana |
AT3G52170:CDS:4 | 769 | Chr3: 19347792-19348560 | Arabidopsis thaliana |
AT3G52170:CDS:2 | 240 | Chr3: 19348642-19348881 | Arabidopsis thaliana |
AT3G52170:CDS:1.2 | 134 | Chr3: 19348966-19349099 | Arabidopsis thaliana |
AT3G52170:CDS:6.3 | 106 | Chr3: 19347039-19347144 | Arabidopsis thaliana |
AT3G52170:CDS:5.3 | 170 | Chr3: 19347244-19347413 | Arabidopsis thaliana |
AT3G52170:CDS:4.1 | 769 | Chr3: 19347792-19348560 | Arabidopsis thaliana |
AT3G52170:CDS:2.1 | 240 | Chr3: 19348642-19348881 | Arabidopsis thaliana |
AT3G52170:CDS:1.3 | 134 | Chr3: 19348966-19349099 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G52170:exon:11 | 393 | Chr3: 19346752-19347144 | Arabidopsis thaliana |
AT3G52170:exon:10 | 386 | Chr3: 19346759-19347144 | Arabidopsis thaliana |
AT3G52170:exon:6 | 1090 | Chr3: 19347792-19348881 | Arabidopsis thaliana |
AT3G52170:exon:1 | 162 | Chr3: 19349394-19349555 | Arabidopsis thaliana |
AT3G52170:exon:4 | 167 | Chr3: 19348966-19349132 | Arabidopsis thaliana |
AT3G52170:exon:9 | 346 | Chr3: 19346799-19347144 | Arabidopsis thaliana |
AT3G52170:exon:8 | 170 | Chr3: 19347244-19347413 | Arabidopsis thaliana |
AT3G52170:exon:7 | 769 | Chr3: 19347792-19348560 | Arabidopsis thaliana |
AT3G52170:exon:5 | 240 | Chr3: 19348642-19348881 | Arabidopsis thaliana |
AT3G52170:exon:3 | 181 | Chr3: 19348966-19349146 | Arabidopsis thaliana |
AT3G52170:exon:2 | 134 | Chr3: 19349394-19349527 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G52170:five_prime_UTR:1 | 162 | Chr3: 19349394-19349555 | Arabidopsis thaliana |
AT3G52170:five_prime_UTR:4 | 33 | Chr3: 19349100-19349132 | Arabidopsis thaliana |
AT3G52170:five_prime_UTR:3 | 47 | Chr3: 19349100-19349146 | Arabidopsis thaliana |
AT3G52170:five_prime_UTR:2 | 134 | Chr3: 19349394-19349527 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G52170.2 | 1996 | Chr3: 19346752-19349555 |
AT3G52170.1 | 1975 | Chr3: 19346759-19349555 |
AT3G52170.4 | 1826 | Chr3: 19346799-19349527 |
AT3G52170.3 | 1840 | Chr3: 19346799-19349527 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G52170:three_prime_UTR:3 | 287 | Chr3: 19346752-19347038 | Arabidopsis thaliana |
AT3G52170:three_prime_UTR:2 | 280 | Chr3: 19346759-19347038 | Arabidopsis thaliana |
AT3G52170:three_prime_UTR:1 | 240 | Chr3: 19346799-19347038 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...