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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G52155:CDS:1 | 184 | Chr3: 19343740-19343923 | Arabidopsis thaliana |
AT3G52155:CDS:3 | 100 | Chr3: 19344011-19344110 | Arabidopsis thaliana |
AT3G52155:CDS:4 | 180 | Chr3: 19344187-19344366 | Arabidopsis thaliana |
AT3G52155:CDS:5 | 118 | Chr3: 19344444-19344561 | Arabidopsis thaliana |
AT3G52155:CDS:8 | 75 | Chr3: 19344648-19344722 | Arabidopsis thaliana |
AT3G52155:CDS:1.1 | 184 | Chr3: 19343740-19343923 | Arabidopsis thaliana |
AT3G52155:CDS:3.1 | 100 | Chr3: 19344011-19344110 | Arabidopsis thaliana |
AT3G52155:CDS:4.1 | 180 | Chr3: 19344187-19344366 | Arabidopsis thaliana |
AT3G52155:CDS:6 | 127 | Chr3: 19344444-19344570 | Arabidopsis thaliana |
AT3G52155:CDS:1.2 | 184 | Chr3: 19343740-19343923 | Arabidopsis thaliana |
AT3G52155:CDS:3.2 | 100 | Chr3: 19344011-19344110 | Arabidopsis thaliana |
AT3G52155:CDS:4.2 | 180 | Chr3: 19344187-19344366 | Arabidopsis thaliana |
AT3G52155:CDS:5.1 | 118 | Chr3: 19344444-19344561 | Arabidopsis thaliana |
AT3G52155:CDS:7 | 71 | Chr3: 19344648-19344718 | Arabidopsis thaliana |
AT3G52155:CDS:9 | 4 | Chr3: 19345210-19345213 | Arabidopsis thaliana |
AT3G52155:CDS:2 | 137 | Chr3: 19343974-19344110 | Arabidopsis thaliana |
AT3G52155:CDS:4.3 | 180 | Chr3: 19344187-19344366 | Arabidopsis thaliana |
AT3G52155:CDS:5.2 | 118 | Chr3: 19344444-19344561 | Arabidopsis thaliana |
AT3G52155:CDS:8.1 | 75 | Chr3: 19344648-19344722 | Arabidopsis thaliana |
AT3G52160:CDS:4 | 462 | Chr3: 19345069-19345530 | Arabidopsis thaliana |
AT3G52160:CDS:4.1 | 462 | Chr3: 19345069-19345530 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G52155:exon:1 | 387 | Chr3: 19343537-19343923 | Arabidopsis thaliana |
AT3G52155:exon:7 | 578 | Chr3: 19344444-19345021 | Arabidopsis thaliana |
AT3G52155:exon:2 | 229 | Chr3: 19343695-19343923 | Arabidopsis thaliana |
AT3G52155:exon:4 | 100 | Chr3: 19344011-19344110 | Arabidopsis thaliana |
AT3G52155:exon:8 | 71 | Chr3: 19344648-19344718 | Arabidopsis thaliana |
AT3G52155:exon:10 | 308 | Chr3: 19345210-19345517 | Arabidopsis thaliana |
AT3G52155:exon:3 | 154 | Chr3: 19343957-19344110 | Arabidopsis thaliana |
AT3G52155:exon:5 | 180 | Chr3: 19344187-19344366 | Arabidopsis thaliana |
AT3G52155:exon:6 | 118 | Chr3: 19344444-19344561 | Arabidopsis thaliana |
AT3G52155:exon:9 | 374 | Chr3: 19344648-19345021 | Arabidopsis thaliana |
AT3G52160:exon:4 | 559 | Chr3: 19344972-19345530 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G52155:five_prime_UTR:1 | 203 | Chr3: 19343537-19343739 | Arabidopsis thaliana |
AT3G52155:five_prime_UTR:2 | 45 | Chr3: 19343695-19343739 | Arabidopsis thaliana |
AT3G52155:five_prime_UTR:3 | 17 | Chr3: 19343957-19343973 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G52160 | locus:2083825 | KCS15 | 3-ketoacyl-CoA synthase 15 | 1697 | Chr3: 19344972-19346668 | A. thaliana | 3-ketoacyl-CoA synthase 15;(source:Araport11) | Encodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). | 3-ketoacyl-CoA synthase 15 | KCS15 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G52155.1 | 1159 | Chr3: 19343537-19345021 |
AT3G52155.2 | 1245 | Chr3: 19343537-19345021 |
AT3G52155.3 | 1006 | Chr3: 19343695-19345517 |
AT3G52155.4 | 826 | Chr3: 19343957-19345021 |
AT3G52160.2 | 1612 | Chr3: 19344972-19346668 |
AT3G52160.1 | 1530 | Chr3: 19344972-19346668 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G52155:three_prime_UTR:1 | 451 | Chr3: 19344571-19345021 | Arabidopsis thaliana |
AT3G52155:three_prime_UTR:3 | 304 | Chr3: 19345214-19345517 | Arabidopsis thaliana |
AT3G52155:three_prime_UTR:2 | 299 | Chr3: 19344723-19345021 | Arabidopsis thaliana |
AT3G52160:three_prime_UTR:1 | 97 | Chr3: 19344972-19345068 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
Y3515_ARATH | similarity | Belongs to the SixA phosphatase family. |
Function
Gene Ontology
cellular component | |
---|---|
chloroplast | ECO |
molecular function | |
hydrolase activity | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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