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Gene : VPS35C A. thaliana

DB identifier  ? AT3G51310 Secondary Identifier  ? locus:2080888
Name  ? VPS35 homolog C Brief Description  VPS35 homolog C
TAIR Computational Description  VPS35 homolog C;(source:Araport11)
TAIR Curator Summary  Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.
TAIR Short Description  VPS35 homolog C
TAIR Aliases  VPS35C

1 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5124  
Location: Chr3:19044331-19049454 reverse strand

Gene models - VPS35C AT3G51310

? Gene models

Transcripts: 1  Exons: 21  Introns: 20 

Overlapping Features

? Genome features that overlap coordinates of this Gene

22 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
VP35C_ARATH function Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. Also involved in the efficient sorting of seed storage proteins (By similarity). The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane.
VP35C_ARATH similarity Belongs to the VPS35 family.

1 Proteins

Function

Gene Ontology

cellular component
intracellular membrane-bounded organelle  ? ECO  
Golgi apparatus  ? ECO  
cytosol  ? ECO  
membrane  ? ECO  
endosome membrane  ? ECO  
retromer, cargo-selective complex  ? ECO  
multivesicular body  ? ECO  
retromer complex  ? ECO  
molecular function
No terms in this category.
biological process
retrograde transport, endosome to Golgi  ? ECO  
protein transport  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets