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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G51075.1 | 3140 | Chr3: 18968649-18972870 |
AT3G51075.2 | 2153 | Chr3: 18968649-18972870 |
AT3G51075.3 | 3122 | Chr3: 18968654-18972835 |
AT3G51075.4 | 3458 | Chr3: 18968654-18972835 |
AT3G51075.5 | 2186 | Chr3: 18968654-18972835 |
AT3G51075.6 | 2626 | Chr3: 18968654-18972835 |
AT3G51075.7 | 1671 | Chr3: 18968703-18971767 |
AT3G51075.8 | 3887 | Chr3: 18968703-18972824 |
AT3G51075.9 | 3043 | Chr3: 18968703-18972824 |
AT3G51075.10 | 2933 | Chr3: 18968712-18972825 |
AT3G51075.11 | 2892 | Chr3: 18968712-18972825 |
AT3G51075.12 | 2913 | Chr3: 18968712-18972825 |
AT3G51075.13 | 1755 | Chr3: 18968743-18972285 |
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G51070:CDS:1 | 1305 | Chr3: 18969068-18970372 | Arabidopsis thaliana |
AT3G51070:CDS:2 | 150 | Chr3: 18970462-18970611 | Arabidopsis thaliana |
AT3G51070:CDS:3 | 382 | Chr3: 18970715-18971096 | Arabidopsis thaliana |
AT3G51070:CDS:4 | 175 | Chr3: 18971187-18971361 | Arabidopsis thaliana |
AT3G51070:CDS:5 | 273 | Chr3: 18971452-18971724 | Arabidopsis thaliana |
AT3G51070:CDS:7 | 214 | Chr3: 18971807-18972020 | Arabidopsis thaliana |
AT3G51070:CDS:1.1 | 1305 | Chr3: 18969068-18970372 | Arabidopsis thaliana |
AT3G51070:CDS:2.1 | 150 | Chr3: 18970462-18970611 | Arabidopsis thaliana |
AT3G51070:CDS:3.1 | 382 | Chr3: 18970715-18971096 | Arabidopsis thaliana |
AT3G51070:CDS:4.1 | 175 | Chr3: 18971187-18971361 | Arabidopsis thaliana |
AT3G51070:CDS:5.1 | 273 | Chr3: 18971452-18971724 | Arabidopsis thaliana |
AT3G51070:CDS:6 | 195 | Chr3: 18971807-18972001 | Arabidopsis thaliana |
AT3G51070:CDS:8 | 208 | Chr3: 18972084-18972291 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G51075:exon:28 | 1707 | Chr3: 18968649-18970355 | Arabidopsis thaliana |
AT3G51075:exon:29 | 720 | Chr3: 18968649-18969368 | Arabidopsis thaliana |
AT3G51075:exon:26 | 1702 | Chr3: 18968654-18970355 | Arabidopsis thaliana |
AT3G51075:exon:27 | 715 | Chr3: 18968654-18969368 | Arabidopsis thaliana |
AT3G51075:exon:18 | 832 | Chr3: 18970448-18971279 | Arabidopsis thaliana |
AT3G51075:exon:6 | 890 | Chr3: 18971946-18972835 | Arabidopsis thaliana |
AT3G51075:exon:11 | 277 | Chr3: 18971491-18971767 | Arabidopsis thaliana |
AT3G51075:exon:24 | 1653 | Chr3: 18968703-18970355 | Arabidopsis thaliana |
AT3G51075:exon:17 | 1860 | Chr3: 18970448-18972307 | Arabidopsis thaliana |
AT3G51075:exon:4 | 374 | Chr3: 18972451-18972824 | Arabidopsis thaliana |
AT3G51075:exon:25 | 666 | Chr3: 18968703-18969368 | Arabidopsis thaliana |
AT3G51075:exon:16 | 2377 | Chr3: 18970448-18972824 | Arabidopsis thaliana |
AT3G51075:exon:15 | 278 | Chr3: 18970747-18971024 | Arabidopsis thaliana |
AT3G51075:exon:9 | 817 | Chr3: 18971491-18972307 | Arabidopsis thaliana |
AT3G51075:exon:8 | 541 | Chr3: 18971767-18972307 | Arabidopsis thaliana |
AT3G51075:exon:23 | 1356 | Chr3: 18968712-18970067 | Arabidopsis thaliana |
AT3G51075:exon:21 | 51 | Chr3: 18970305-18970355 | Arabidopsis thaliana |
AT3G51075:exon:19 | 577 | Chr3: 18970448-18971024 | Arabidopsis thaliana |
AT3G51075:exon:13 | 151 | Chr3: 18971129-18971279 | Arabidopsis thaliana |
AT3G51075:exon:10 | 338 | Chr3: 18971491-18971828 | Arabidopsis thaliana |
AT3G51075:exon:7 | 362 | Chr3: 18971946-18972307 | Arabidopsis thaliana |
AT3G51075:exon:22 | 626 | Chr3: 18968743-18969368 | Arabidopsis thaliana |
AT3G51075:exon:20 | 202 | Chr3: 18970448-18970649 | Arabidopsis thaliana |
AT3G51075:exon:14 | 533 | Chr3: 18970747-18971279 | Arabidopsis thaliana |
AT3G51075:exon:12 | 138 | Chr3: 18971491-18971628 | Arabidopsis thaliana |
AT3G51075:exon:5 | 256 | Chr3: 18972030-18972285 | Arabidopsis thaliana |
AT3G51070:exon:7 | 214 | Chr3: 18971807-18972020 | Arabidopsis thaliana |
AT3G51070:exon:1 | 1305 | Chr3: 18969068-18970372 | Arabidopsis thaliana |
AT3G51070:exon:2 | 150 | Chr3: 18970462-18970611 | Arabidopsis thaliana |
AT3G51070:exon:3 | 382 | Chr3: 18970715-18971096 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G51075 | locus:4010713824 | AT3G51075 | 4222 | Chr3: 18968649-18972870 | A. thaliana | Natural antisense transcript overlaps with AT3G51070;(source:Araport11) | NULL | other RNA | ||
AT3G08175 | AT3G08175 | 278 | Chr3: 18972508-18972785 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G51070.2 | 2499 | Chr3: 18969068-18972020 |
AT3G51070.1 | 2951 | Chr3: 18969068-18972554 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G51070:three_prime_UTR:1 | 263 | Chr3: 18972292-18972554 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1I9LMQ3_ARATH PMTR_ARATH | similarity | Belongs to the methyltransferase superfamily. |
Function
Gene Ontology
cellular component | |
---|---|
endoplasmic reticulum membrane | ECO |
molecular function | |
methyltransferase activity | ECO |
biological process | |
methylation | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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