help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : LTI30 A. thaliana

DB identifier  ? AT3G50970 Secondary Identifier  ? locus:2080918
Name  ? LOW TEMPERATURE-INDUCED 30 Brief Description  dehydrin family protein
TAIR Computational Description  dehydrin family protein;(source:Araport11)
TAIR Curator Summary  Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid. The mRNA is cell-to-cell mobile.
TAIR Short Description  dehydrin family protein
TAIR Aliases  LTI30, XERO2

5 Gene Rifs

1 Organism

23 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 969  
Location: Chr3:18940643-18941611

Gene models - LTI30 AT3G50970

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features Displayer

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
XERO2_ARATH similarity Belongs to the plant dehydrin family.
XERO2_ARATH tissue specificity Expressed in desiccated pollen grains or seeds, roots, stems, trichomes and the vascular tissues of leaves, and in all tissues of young seedlings.

1 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
membrane  ? ECO  
molecular function
nickel cation binding  ? ECO  
cobalt ion binding  ? ECO  
zinc ion binding  ? ECO  
copper ion binding  ? ECO  
biological process
response to abscisic acid  ? ECO  
cold acclimation  ? ECO  
response to cold  ? ECO  
defense response to fungus  ? ECO  
response to water deprivation  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets