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Gene : AT3G50610 A. thaliana

DB identifier  ? AT3G50610 Secondary Identifier  ? locus:2098695
Brief Description  DNA-directed RNA polymerase II subunit RPB1-like protein
TAIR Computational Description  DNA-directed RNA polymerase II subunit RPB1-like protein;(source:Araport11)
TAIR Curator Summary  C-TERMINALLY ENCODED PEPTIDE (CEP), which is a post-translationally modified peptides that plays essential role in root and shoot development, nitrogen absorption, nodule formation, and stress resilience.
TAIR Short Description  NULL
TAIR Aliases  CEP9

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 964  
Location: Chr3:18779551-18780514 reverse strand

Gene models - AT3G50610 AT3G50610

? Gene models

Transcripts: 2  Exons: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PCEP9_ARATH function Extracellular signaling peptide that represses primary root growth rate and significantly inhibits lateral root formation. Modulates leaf morphology (PubMed:24179096). Regulates systemic nitrogen (N)-demand signaling. Mediates up-regulation of genes involved in N uptake and assimilation pathways (PubMed:25324386).
PCEP9_ARATH similarity Belongs to the C-terminally encoded plant signaling peptide (CEP) family.
PCEP9_ARATH subcellular location Accumulates in xylem sap.
PCEP9_ARATH subcellular location Accumulates in xylem sap under nitrogen (N)-starved conditions.
PCEP9_ARATH tissue specificity Expressed in lateral root primordia and in lateral roots excluding the meristem region. Also present in the aerial tissues, such as leaf petioles and the shoot apex region.

1 Proteins

Function

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets