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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G50190:CDS:5 | 5 | Chr3: 18608434-18608438 | Arabidopsis thaliana |
AT3G50190:CDS:2 | 428 | Chr3: 18610005-18610432 | Arabidopsis thaliana |
AT3G50190:CDS:1 | 620 | Chr3: 18610550-18611169 | Arabidopsis thaliana |
AT3G50190:CDS:4 | 434 | Chr3: 18609164-18609597 | Arabidopsis thaliana |
AT3G50190:CDS:2.1 | 428 | Chr3: 18610005-18610432 | Arabidopsis thaliana |
AT3G50190:CDS:1.1 | 620 | Chr3: 18610550-18611169 | Arabidopsis thaliana |
AT3G50190:CDS:3 | 505 | Chr3: 18609928-18610432 | Arabidopsis thaliana |
AT3G50190:CDS:1.2 | 620 | Chr3: 18610550-18611169 | Arabidopsis thaliana |
AT3G50190:CDS:3.1 | 505 | Chr3: 18609928-18610432 | Arabidopsis thaliana |
AT3G50190:CDS:1.3 | 620 | Chr3: 18610550-18611169 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G50190:exon:7 | 326 | Chr3: 18608113-18608438 | Arabidopsis thaliana |
AT3G50190:exon:3 | 428 | Chr3: 18610005-18610432 | Arabidopsis thaliana |
AT3G50190:exon:6 | 529 | Chr3: 18609069-18609597 | Arabidopsis thaliana |
AT3G50190:exon:4 | 689 | Chr3: 18609744-18610432 | Arabidopsis thaliana |
AT3G50190:exon:2 | 713 | Chr3: 18610550-18611262 | Arabidopsis thaliana |
AT3G50190:exon:5 | 1319 | Chr3: 18609114-18610432 | Arabidopsis thaliana |
AT3G50190:exon:1 | 714 | Chr3: 18610550-18611263 | Arabidopsis thaliana |
AT3G08100:exon:1 | 271 | Chr3: 18608210-18608480 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G50190:five_prime_UTR:2 | 93 | Chr3: 18611170-18611262 | Arabidopsis thaliana |
AT3G50190:five_prime_UTR:1 | 94 | Chr3: 18611170-18611263 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G08100 | AT3G08100 | 271 | Chr3: 18608210-18608480 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G50190.2 | 1467 | Chr3: 18608113-18611262 |
AT3G50190.1 | 1670 | Chr3: 18609069-18611262 |
AT3G50190.3 | 1931 | Chr3: 18609069-18611262 |
AT3G50190.4 | 2033 | Chr3: 18609114-18611263 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G50190:three_prime_UTR:5 | 321 | Chr3: 18608113-18608433 | Arabidopsis thaliana |
AT3G50190:three_prime_UTR:4 | 95 | Chr3: 18609069-18609163 | Arabidopsis thaliana |
AT3G50190:three_prime_UTR:3 | 529 | Chr3: 18609069-18609597 | Arabidopsis thaliana |
AT3G50190:three_prime_UTR:1 | 184 | Chr3: 18609744-18609927 | Arabidopsis thaliana |
AT3G50190:three_prime_UTR:2 | 814 | Chr3: 18609114-18609927 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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