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Gene : DMS3 A. thaliana

DB identifier  ? AT3G49250 Secondary Identifier  ? locus:2082876
Name  ? DEFECTIVE IN MERISTEM SILENCING 3 Brief Description  defective in meristem silencing 3
TAIR Computational Description  defective in meristem silencing 3;(source:Araport11)
TAIR Curator Summary  Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation.
TAIR Short Description  defective in meristem silencing 3
TAIR Aliases  DMS3, IDN1

6 Gene Rifs

1 Organism

22 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5039  
Location: Chr3:18255960-18260998 reverse strand

Gene models - DMS3 AT3G49250

? Gene models

Transcripts: 1  Exons: 7  Introns: 6 

Overlapping Features

? Genome features that overlap coordinates of this Gene

8 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
DMS3_ARATH function Component of the RNA-directed DNA methylation (RdDM) machinery, probably by facilitating an RNAi-mediated epigenetic modification involving secondary siRNAs and spreading of DNA methylation, thus leading to gene silencing. Involved in the assembly of RNA polymerase V (Pol V) transcription initiation or elongation complexes at the chromatin, as a component of the DDR complex. Required for de novo DNA methylation.

1 Proteins

Function

Gene Ontology

cellular component
RNA polymerase V complex  ? ECO  
molecular function
protein homodimerization activity  ? ECO  
biological process
gene silencing by siRNA-directed DNA methylation  ? ECO  
regulatory ncRNA-mediated gene silencing  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets