External Links
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G49055:CDS:1 | 789 | Chr3: 18186180-18186968 | Arabidopsis thaliana |
AT3G49060:CDS:15 | 4 | Chr3: 18187054-18187057 | Arabidopsis thaliana |
AT3G49060:CDS:13 | 179 | Chr3: 18187390-18187568 | Arabidopsis thaliana |
AT3G49060:CDS:12 | 726 | Chr3: 18187650-18188375 | Arabidopsis thaliana |
AT3G49060:CDS:10 | 474 | Chr3: 18188527-18189000 | Arabidopsis thaliana |
AT3G49060:CDS:9 | 147 | Chr3: 18189349-18189495 | Arabidopsis thaliana |
AT3G49060:CDS:7 | 188 | Chr3: 18189803-18189990 | Arabidopsis thaliana |
AT3G49060:CDS:6 | 146 | Chr3: 18190074-18190219 | Arabidopsis thaliana |
AT3G49060:CDS:5 | 105 | Chr3: 18190459-18190563 | Arabidopsis thaliana |
AT3G49060:CDS:4 | 122 | Chr3: 18190652-18190773 | Arabidopsis thaliana |
AT3G49060:CDS:3 | 122 | Chr3: 18191064-18191185 | Arabidopsis thaliana |
AT3G49060:CDS:1 | 175 | Chr3: 18191704-18191878 | Arabidopsis thaliana |
AT3G49060:CDS:14 | 183 | Chr3: 18187386-18187568 | Arabidopsis thaliana |
AT3G49060:CDS:12.1 | 726 | Chr3: 18187650-18188375 | Arabidopsis thaliana |
AT3G49060:CDS:11 | 528 | Chr3: 18188473-18189000 | Arabidopsis thaliana |
AT3G49060:CDS:9.1 | 147 | Chr3: 18189349-18189495 | Arabidopsis thaliana |
AT3G49060:CDS:8 | 164 | Chr3: 18189803-18189966 | Arabidopsis thaliana |
AT3G49060:CDS:6.1 | 146 | Chr3: 18190074-18190219 | Arabidopsis thaliana |
AT3G49060:CDS:5.1 | 105 | Chr3: 18190459-18190563 | Arabidopsis thaliana |
AT3G49060:CDS:4.1 | 122 | Chr3: 18190652-18190773 | Arabidopsis thaliana |
AT3G49060:CDS:3.1 | 122 | Chr3: 18191064-18191185 | Arabidopsis thaliana |
AT3G49060:CDS:1.1 | 175 | Chr3: 18191704-18191878 | Arabidopsis thaliana |
AT3G49060:CDS:14.1 | 183 | Chr3: 18187386-18187568 | Arabidopsis thaliana |
AT3G49060:CDS:12.2 | 726 | Chr3: 18187650-18188375 | Arabidopsis thaliana |
AT3G49060:CDS:11.1 | 528 | Chr3: 18188473-18189000 | Arabidopsis thaliana |
AT3G49060:CDS:9.2 | 147 | Chr3: 18189349-18189495 | Arabidopsis thaliana |
AT3G49060:CDS:8.1 | 164 | Chr3: 18189803-18189966 | Arabidopsis thaliana |
AT3G49060:CDS:6.2 | 146 | Chr3: 18190074-18190219 | Arabidopsis thaliana |
AT3G49060:CDS:5.2 | 105 | Chr3: 18190459-18190563 | Arabidopsis thaliana |
AT3G49060:CDS:4.2 | 122 | Chr3: 18190652-18190773 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G49055:exon:1 | 789 | Chr3: 18186180-18186968 | Arabidopsis thaliana |
AT3G49060:exon:17 | 160 | Chr3: 18186898-18187057 | Arabidopsis thaliana |
AT3G49060:exon:14 | 179 | Chr3: 18187390-18187568 | Arabidopsis thaliana |
AT3G49060:exon:11 | 474 | Chr3: 18188527-18189000 | Arabidopsis thaliana |
AT3G49060:exon:8 | 188 | Chr3: 18189803-18189990 | Arabidopsis thaliana |
AT3G49060:exon:2 | 289 | Chr3: 18191704-18191992 | Arabidopsis thaliana |
AT3G49060:exon:16 | 431 | Chr3: 18187138-18187568 | Arabidopsis thaliana |
AT3G49060:exon:4 | 122 | Chr3: 18191064-18191185 | Arabidopsis thaliana |
AT3G49060:exon:1 | 442 | Chr3: 18191704-18192145 | Arabidopsis thaliana |
AT3G49060:exon:15 | 381 | Chr3: 18187188-18187568 | Arabidopsis thaliana |
AT3G49060:exon:13 | 726 | Chr3: 18187650-18188375 | Arabidopsis thaliana |
AT3G49060:exon:12 | 528 | Chr3: 18188473-18189000 | Arabidopsis thaliana |
AT3G49060:exon:10 | 147 | Chr3: 18189349-18189495 | Arabidopsis thaliana |
AT3G49060:exon:9 | 164 | Chr3: 18189803-18189966 | Arabidopsis thaliana |
AT3G49060:exon:7 | 146 | Chr3: 18190074-18190219 | Arabidopsis thaliana |
AT3G49060:exon:6 | 105 | Chr3: 18190459-18190563 | Arabidopsis thaliana |
AT3G49060:exon:5 | 122 | Chr3: 18190652-18190773 | Arabidopsis thaliana |
AT3G49060:exon:3 | 1057 | Chr3: 18191064-18192120 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G49060:five_prime_UTR:2 | 114 | Chr3: 18191879-18191992 | Arabidopsis thaliana |
AT3G49060:five_prime_UTR:1 | 267 | Chr3: 18191879-18192145 | Arabidopsis thaliana |
AT3G49060:five_prime_UTR:3 | 859 | Chr3: 18191262-18192120 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G49055 | locus:504955632 | AT3G49055 | 1860 | Chr3: 18185109-18186968 | A. thaliana | ATP-binding protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G49055.1 | 1500 | Chr3: 18185109-18186968 |
AT3G49060.2 | 2658 | Chr3: 18186898-18191992 |
AT3G49060.1 | 2933 | Chr3: 18187138-18192145 |
AT3G49060.3 | 3376 | Chr3: 18187188-18192120 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G49060:three_prime_UTR:3 | 156 | Chr3: 18186898-18187053 | Arabidopsis thaliana |
AT3G49060:three_prime_UTR:2 | 248 | Chr3: 18187138-18187385 | Arabidopsis thaliana |
AT3G49060:three_prime_UTR:1 | 198 | Chr3: 18187188-18187385 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
F4IWQ9_ARATH A0A1I9LPB5_ARATH PUB32_ARATH-2 PUB32_ARATH | function | Functions as an E3 ubiquitin ligase. |
F4IWQ9_ARATH A0A1I9LPB5_ARATH PUB32_ARATH-2 PUB32_ARATH | pathway | Protein modification; protein ubiquitination. |
PUB32_ARATH-2 PUB32_ARATH | similarity | Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
protein kinase activity | ECO |
ubiquitin-protein transferase activity | ECO |
biological process | |
protein ubiquitination | ECO |
protein phosphorylation | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...