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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G47910:CDS:16 | 84 | Chr3: 17674737-17674820 | Arabidopsis thaliana |
AT3G47910:CDS:15 | 87 | Chr3: 17674903-17674989 | Arabidopsis thaliana |
AT3G47910:CDS:14 | 134 | Chr3: 17675133-17675266 | Arabidopsis thaliana |
AT3G47910:CDS:13 | 148 | Chr3: 17675357-17675504 | Arabidopsis thaliana |
AT3G47910:CDS:12 | 276 | Chr3: 17675591-17675866 | Arabidopsis thaliana |
AT3G47910:CDS:11 | 216 | Chr3: 17675966-17676181 | Arabidopsis thaliana |
AT3G47910:CDS:10 | 182 | Chr3: 17676293-17676474 | Arabidopsis thaliana |
AT3G47910:CDS:9 | 96 | Chr3: 17676816-17676911 | Arabidopsis thaliana |
AT3G47910:CDS:7 | 201 | Chr3: 17677230-17677430 | Arabidopsis thaliana |
AT3G47910:CDS:6 | 127 | Chr3: 17677517-17677643 | Arabidopsis thaliana |
AT3G47910:CDS:5 | 313 | Chr3: 17677728-17678040 | Arabidopsis thaliana |
AT3G47910:CDS:4 | 50 | Chr3: 17678162-17678211 | Arabidopsis thaliana |
AT3G47910:CDS:3 | 192 | Chr3: 17678291-17678482 | Arabidopsis thaliana |
AT3G47910:CDS:2 | 129 | Chr3: 17678638-17678766 | Arabidopsis thaliana |
AT3G47910:CDS:1 | 2589 | Chr3: 17678856-17681444 | Arabidopsis thaliana |
AT3G47910:CDS:16.1 | 84 | Chr3: 17674737-17674820 | Arabidopsis thaliana |
AT3G47910:CDS:15.1 | 87 | Chr3: 17674903-17674989 | Arabidopsis thaliana |
AT3G47910:CDS:14.1 | 134 | Chr3: 17675133-17675266 | Arabidopsis thaliana |
AT3G47910:CDS:13.1 | 148 | Chr3: 17675357-17675504 | Arabidopsis thaliana |
AT3G47910:CDS:12.1 | 276 | Chr3: 17675591-17675866 | Arabidopsis thaliana |
AT3G47910:CDS:11.1 | 216 | Chr3: 17675966-17676181 | Arabidopsis thaliana |
AT3G47910:CDS:10.1 | 182 | Chr3: 17676293-17676474 | Arabidopsis thaliana |
AT3G47910:CDS:9.1 | 96 | Chr3: 17676816-17676911 | Arabidopsis thaliana |
AT3G47910:CDS:8 | 198 | Chr3: 17677230-17677427 | Arabidopsis thaliana |
AT3G47910:CDS:6.1 | 127 | Chr3: 17677517-17677643 | Arabidopsis thaliana |
AT3G47910:CDS:5.1 | 313 | Chr3: 17677728-17678040 | Arabidopsis thaliana |
AT3G47910:CDS:4.1 | 50 | Chr3: 17678162-17678211 | Arabidopsis thaliana |
AT3G47910:CDS:3.1 | 192 | Chr3: 17678291-17678482 | Arabidopsis thaliana |
AT3G47910:CDS:2.1 | 129 | Chr3: 17678638-17678766 | Arabidopsis thaliana |
AT3G47910:CDS:1.1 | 2589 | Chr3: 17678856-17681444 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G47910:exon:18 | 534 | Chr3: 17674287-17674820 | Arabidopsis thaliana |
AT3G47910:exon:8 | 201 | Chr3: 17677230-17677430 | Arabidopsis thaliana |
AT3G47910:exon:2 | 2874 | Chr3: 17678856-17681729 | Arabidopsis thaliana |
AT3G47910:exon:17 | 491 | Chr3: 17674330-17674820 | Arabidopsis thaliana |
AT3G47910:exon:16 | 87 | Chr3: 17674903-17674989 | Arabidopsis thaliana |
AT3G47910:exon:15 | 134 | Chr3: 17675133-17675266 | Arabidopsis thaliana |
AT3G47910:exon:14 | 148 | Chr3: 17675357-17675504 | Arabidopsis thaliana |
AT3G47910:exon:13 | 276 | Chr3: 17675591-17675866 | Arabidopsis thaliana |
AT3G47910:exon:12 | 216 | Chr3: 17675966-17676181 | Arabidopsis thaliana |
AT3G47910:exon:11 | 182 | Chr3: 17676293-17676474 | Arabidopsis thaliana |
AT3G47910:exon:10 | 96 | Chr3: 17676816-17676911 | Arabidopsis thaliana |
AT3G47910:exon:9 | 198 | Chr3: 17677230-17677427 | Arabidopsis thaliana |
AT3G47910:exon:7 | 127 | Chr3: 17677517-17677643 | Arabidopsis thaliana |
AT3G47910:exon:6 | 313 | Chr3: 17677728-17678040 | Arabidopsis thaliana |
AT3G47910:exon:5 | 50 | Chr3: 17678162-17678211 | Arabidopsis thaliana |
AT3G47910:exon:4 | 192 | Chr3: 17678291-17678482 | Arabidopsis thaliana |
AT3G47910:exon:3 | 129 | Chr3: 17678638-17678766 | Arabidopsis thaliana |
AT3G47910:exon:1 | 2875 | Chr3: 17678856-17681730 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G47910:five_prime_UTR:2 | 285 | Chr3: 17681445-17681729 | Arabidopsis thaliana |
AT3G47910:five_prime_UTR:1 | 286 | Chr3: 17681445-17681730 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G47910.2 | 5559 | Chr3: 17674287-17681729 |
AT3G47910.1 | 5514 | Chr3: 17674330-17681730 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G47910:three_prime_UTR:2 | 450 | Chr3: 17674287-17674736 | Arabidopsis thaliana |
AT3G47910:three_prime_UTR:1 | 407 | Chr3: 17674330-17674736 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
cysteine-type deubiquitinase activity | ECO |
biological process | |
protein deubiquitination | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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