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Gene : AT3G47400 A. thaliana

DB identifier  ? AT3G47400 Secondary Identifier  ? locus:2099565
Brief Description  Plant invertase/pectin methylesterase inhibitor superfamily
TAIR Computational Description  Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11)
TAIR Curator Summary  Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.
TAIR Short Description  Plant invertase/pectin methylesterase inhibitor superfamily
TAIR Aliases  PMEI-PME33

0 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2609  
Location: Chr3:17465510-17468118

Gene models - AT3G47400 AT3G47400

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PME33_ARATH developmental stage Expressed throughout silique development.
PME33_ARATH function Acts in the modification of cell walls via demethylesterification of cell wall pectin.
PME33_ARATH pathway Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.
PME33_ARATH similarity In the C-terminal section; belongs to the pectinesterase family.
PME33_ARATH similarity In the N-terminal section; belongs to the PMEI family.
PME33_ARATH tissue specificity Expressed in siliques.

1 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
molecular function
enzyme inhibitor activity  ? ECO  
pectinesterase activity  ? ECO  
biological process
pectin catabolic process  ? ECO  
cell wall modification  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets