External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G47150:CDS:2 | 528 | Chr3: 17359238-17359765 | Arabidopsis thaliana |
AT3G47160:CDS:8 | 217 | Chr3: 17360238-17360454 | Arabidopsis thaliana |
AT3G47160:CDS:7 | 235 | Chr3: 17360524-17360758 | Arabidopsis thaliana |
AT3G47160:CDS:6 | 67 | Chr3: 17360846-17360912 | Arabidopsis thaliana |
AT3G47160:CDS:4 | 151 | Chr3: 17360995-17361145 | Arabidopsis thaliana |
AT3G47160:CDS:2 | 68 | Chr3: 17361812-17361879 | Arabidopsis thaliana |
AT3G47160:CDS:8.1 | 217 | Chr3: 17360238-17360454 | Arabidopsis thaliana |
AT3G47160:CDS:7.1 | 235 | Chr3: 17360524-17360758 | Arabidopsis thaliana |
AT3G47160:CDS:6.1 | 67 | Chr3: 17360846-17360912 | Arabidopsis thaliana |
AT3G47160:CDS:4.1 | 151 | Chr3: 17360995-17361145 | Arabidopsis thaliana |
AT3G47160:CDS:3 | 38 | Chr3: 17361631-17361668 | Arabidopsis thaliana |
AT3G47160:CDS:1 | 66 | Chr3: 17361814-17361879 | Arabidopsis thaliana |
AT3G47160:CDS:8.2 | 217 | Chr3: 17360238-17360454 | Arabidopsis thaliana |
AT3G47160:CDS:7.2 | 235 | Chr3: 17360524-17360758 | Arabidopsis thaliana |
AT3G47160:CDS:6.2 | 67 | Chr3: 17360846-17360912 | Arabidopsis thaliana |
AT3G47160:CDS:5 | 108 | Chr3: 17360995-17361102 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G47150:exon:2 | 528 | Chr3: 17359238-17359765 | Arabidopsis thaliana |
AT3G47160:exon:10 | 697 | Chr3: 17359758-17360454 | Arabidopsis thaliana |
AT3G47160:exon:2 | 429 | Chr3: 17361812-17362240 | Arabidopsis thaliana |
AT3G47160:exon:6 | 151 | Chr3: 17360995-17361145 | Arabidopsis thaliana |
AT3G47160:exon:4 | 38 | Chr3: 17361631-17361668 | Arabidopsis thaliana |
AT3G47160:exon:1 | 305 | Chr3: 17361814-17362118 | Arabidopsis thaliana |
AT3G47160:exon:9 | 464 | Chr3: 17359991-17360454 | Arabidopsis thaliana |
AT3G47160:exon:8 | 235 | Chr3: 17360524-17360758 | Arabidopsis thaliana |
AT3G47160:exon:7 | 67 | Chr3: 17360846-17360912 | Arabidopsis thaliana |
AT3G47160:exon:5 | 674 | Chr3: 17360995-17361668 | Arabidopsis thaliana |
AT3G47160:exon:3 | 307 | Chr3: 17361812-17362118 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G47160:five_prime_UTR:1 | 361 | Chr3: 17361880-17362240 | Arabidopsis thaliana |
AT3G47160:five_prime_UTR:2 | 239 | Chr3: 17361880-17362118 | Arabidopsis thaliana |
AT3G47160:five_prime_UTR:4 | 566 | Chr3: 17361103-17361668 | Arabidopsis thaliana |
AT3G47160:five_prime_UTR:3 | 307 | Chr3: 17361812-17362118 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G47150 | locus:2075591 | AT3G47150 | 1175 | Chr3: 17358591-17359765 | A. thaliana | F-box and associated interaction domains-containing protein;(source:Araport11) | NULL | F-box and associated interaction domains-containing protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G47150.1 | 1083 | Chr3: 17358591-17359765 |
AT3G47160.1 | 1579 | Chr3: 17359758-17362240 |
AT3G47160.2 | 1260 | Chr3: 17359991-17362118 |
AT3G47160.3 | 1747 | Chr3: 17359991-17362118 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G47160:three_prime_UTR:2 | 480 | Chr3: 17359758-17360237 | Arabidopsis thaliana |
AT3G47160:three_prime_UTR:1 | 247 | Chr3: 17359991-17360237 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
metal ion binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...