External Links
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 20, Exons: 14, Five Prime UTRs: 2, mRNAs: 2, Three Prime UTRs: 3, Transposable Elements: 3, Transposon Fragments: 3
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G46490:CDS:1 | 108 | Chr3: 17115629-17115736 | Arabidopsis thaliana |
AT3G46490:CDS:2 | 196 | Chr3: 17115849-17116044 | Arabidopsis thaliana |
AT3G46490:CDS:3 | 99 | Chr3: 17116132-17116230 | Arabidopsis thaliana |
AT3G46490:CDS:4 | 52 | Chr3: 17116303-17116354 | Arabidopsis thaliana |
AT3G46490:CDS:5 | 122 | Chr3: 17118273-17118394 | Arabidopsis thaliana |
AT3G46490:CDS:6 | 98 | Chr3: 17118474-17118571 | Arabidopsis thaliana |
AT3G46490:CDS:7 | 59 | Chr3: 17118649-17118707 | Arabidopsis thaliana |
AT3G46490:CDS:8 | 57 | Chr3: 17118839-17118895 | Arabidopsis thaliana |
AT3G46490:CDS:9 | 46 | Chr3: 17119005-17119050 | Arabidopsis thaliana |
AT3G46490:CDS:11 | 80 | Chr3: 17119207-17119286 | Arabidopsis thaliana |
AT3G46490:CDS:12 | 76 | Chr3: 17119376-17119451 | Arabidopsis thaliana |
AT3G46490:CDS:1.1 | 108 | Chr3: 17115629-17115736 | Arabidopsis thaliana |
AT3G46490:CDS:2.1 | 196 | Chr3: 17115849-17116044 | Arabidopsis thaliana |
AT3G46490:CDS:3.1 | 99 | Chr3: 17116132-17116230 | Arabidopsis thaliana |
AT3G46490:CDS:4.1 | 52 | Chr3: 17116303-17116354 | Arabidopsis thaliana |
AT3G46490:CDS:5.1 | 122 | Chr3: 17118273-17118394 | Arabidopsis thaliana |
AT3G46490:CDS:6.1 | 98 | Chr3: 17118474-17118571 | Arabidopsis thaliana |
AT3G46490:CDS:7.1 | 59 | Chr3: 17118649-17118707 | Arabidopsis thaliana |
AT3G46490:CDS:8.1 | 57 | Chr3: 17118839-17118895 | Arabidopsis thaliana |
AT3G46490:CDS:10 | 145 | Chr3: 17119005-17119149 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G46490:exon:1 | 254 | Chr3: 17115483-17115736 | Arabidopsis thaliana |
AT3G46490:exon:10 | 46 | Chr3: 17119005-17119050 | Arabidopsis thaliana |
AT3G46490:exon:12 | 80 | Chr3: 17119207-17119286 | Arabidopsis thaliana |
AT3G46490:exon:14 | 415 | Chr3: 17119376-17119790 | Arabidopsis thaliana |
AT3G46490:exon:2 | 167 | Chr3: 17115570-17115736 | Arabidopsis thaliana |
AT3G46490:exon:3 | 196 | Chr3: 17115849-17116044 | Arabidopsis thaliana |
AT3G46490:exon:4 | 99 | Chr3: 17116132-17116230 | Arabidopsis thaliana |
AT3G46490:exon:5 | 52 | Chr3: 17116303-17116354 | Arabidopsis thaliana |
AT3G46490:exon:6 | 122 | Chr3: 17118273-17118394 | Arabidopsis thaliana |
AT3G46490:exon:7 | 98 | Chr3: 17118474-17118571 | Arabidopsis thaliana |
AT3G46490:exon:8 | 59 | Chr3: 17118649-17118707 | Arabidopsis thaliana |
AT3G46490:exon:9 | 57 | Chr3: 17118839-17118895 | Arabidopsis thaliana |
AT3G46490:exon:11 | 282 | Chr3: 17119005-17119286 | Arabidopsis thaliana |
AT3G46490:exon:13 | 325 | Chr3: 17119376-17119700 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G46490:five_prime_UTR:1 | 146 | Chr3: 17115483-17115628 | Arabidopsis thaliana |
AT3G46490:five_prime_UTR:2 | 59 | Chr3: 17115570-17115628 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G46490.1 | 1478 | Chr3: 17115483-17119790 |
AT3G46490.2 | 1457 | Chr3: 17115570-17119700 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G46490:three_prime_UTR:3 | 339 | Chr3: 17119452-17119790 | Arabidopsis thaliana |
AT3G46490:three_prime_UTR:1 | 137 | Chr3: 17119150-17119286 | Arabidopsis thaliana |
AT3G46490:three_prime_UTR:2 | 325 | Chr3: 17119376-17119700 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE69355 | 289 | Chr3: 17116582-17116870 | Arabidopsis thaliana |
AT3TE69360 | 73 | Chr3: 17116871-17116943 | Arabidopsis thaliana |
AT3TE69365 | 133 | Chr3: 17116944-17117076 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE69355:transposon_fragment:1 | 289 | Chr3: 17116582-17116870 | Arabidopsis thaliana |
AT3TE69360:transposon_fragment:1 | 73 | Chr3: 17116871-17116943 | Arabidopsis thaliana |
AT3TE69365:transposon_fragment:1 | 133 | Chr3: 17116944-17117076 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1I9LPN5_ARATH A0A654FEN4_ARATH | similarity | Belongs to the iron/ascorbate-dependent oxidoreductase family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
dioxygenase activity | ECO |
metal ion binding | ECO |
biological process | |
secondary metabolite biosynthetic process | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...