External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G46450:CDS:7 | 381 | Chr3: 17093297-17093677 | Arabidopsis thaliana |
AT3G46450:CDS:6 | 221 | Chr3: 17093787-17094007 | Arabidopsis thaliana |
AT3G46450:CDS:5 | 257 | Chr3: 17094101-17094357 | Arabidopsis thaliana |
AT3G46450:CDS:4 | 96 | Chr3: 17094458-17094553 | Arabidopsis thaliana |
AT3G46450:CDS:3 | 158 | Chr3: 17094721-17094878 | Arabidopsis thaliana |
AT3G46450:CDS:1 | 348 | Chr3: 17094972-17095319 | Arabidopsis thaliana |
AT3G46450:CDS:7.1 | 381 | Chr3: 17093297-17093677 | Arabidopsis thaliana |
AT3G46450:CDS:6.1 | 221 | Chr3: 17093787-17094007 | Arabidopsis thaliana |
AT3G46450:CDS:5.1 | 257 | Chr3: 17094101-17094357 | Arabidopsis thaliana |
AT3G46450:CDS:4.1 | 96 | Chr3: 17094458-17094553 | Arabidopsis thaliana |
AT3G46450:CDS:3.1 | 158 | Chr3: 17094721-17094878 | Arabidopsis thaliana |
AT3G46450:CDS:1.1 | 348 | Chr3: 17094972-17095319 | Arabidopsis thaliana |
AT3G46450:CDS:7.2 | 381 | Chr3: 17093297-17093677 | Arabidopsis thaliana |
AT3G46450:CDS:6.2 | 221 | Chr3: 17093787-17094007 | Arabidopsis thaliana |
AT3G46450:CDS:5.2 | 257 | Chr3: 17094101-17094357 | Arabidopsis thaliana |
AT3G46450:CDS:4.2 | 96 | Chr3: 17094458-17094553 | Arabidopsis thaliana |
AT3G46450:CDS:2 | 182 | Chr3: 17094721-17094902 | Arabidopsis thaliana |
AT3G46450:CDS:1.2 | 348 | Chr3: 17094972-17095319 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G46450:exon:12 | 830 | Chr3: 17092848-17093677 | Arabidopsis thaliana |
AT3G46450:exon:1 | 239 | Chr3: 17095491-17095729 | Arabidopsis thaliana |
AT3G46450:exon:11 | 234 | Chr3: 17092879-17093112 | Arabidopsis thaliana |
AT3G46450:exon:9 | 392 | Chr3: 17093286-17093677 | Arabidopsis thaliana |
AT3G46450:exon:5 | 158 | Chr3: 17094721-17094878 | Arabidopsis thaliana |
AT3G46450:exon:10 | 740 | Chr3: 17092938-17093677 | Arabidopsis thaliana |
AT3G46450:exon:8 | 221 | Chr3: 17093787-17094007 | Arabidopsis thaliana |
AT3G46450:exon:7 | 257 | Chr3: 17094101-17094357 | Arabidopsis thaliana |
AT3G46450:exon:6 | 96 | Chr3: 17094458-17094553 | Arabidopsis thaliana |
AT3G46450:exon:4 | 182 | Chr3: 17094721-17094902 | Arabidopsis thaliana |
AT3G46450:exon:3 | 440 | Chr3: 17094972-17095411 | Arabidopsis thaliana |
AT3G46450:exon:2 | 149 | Chr3: 17095491-17095639 | Arabidopsis thaliana |
AT3G46460:exon:9 | 492 | Chr3: 17095706-17096197 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G46450:five_prime_UTR:1 | 239 | Chr3: 17095491-17095729 | Arabidopsis thaliana |
AT3G46450:five_prime_UTR:3 | 92 | Chr3: 17095320-17095411 | Arabidopsis thaliana |
AT3G46450:five_prime_UTR:2 | 149 | Chr3: 17095491-17095639 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G46460 | locus:2078231 | UBC13 | ubiquitin-conjugating enzyme 13 | 1760 | Chr3: 17095706-17097465 | A. thaliana | ubiquitin-conjugating enzyme 13;(source:Araport11) | May function together with UBC7 and UBC14 in the plant READ pathway, required in plant responses to multiple stress conditions. | ubiquitin-conjugating enzyme 13 | UBC13 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G46450.1 | 2241 | Chr3: 17092848-17095729 |
AT3G46450.3 | 1947 | Chr3: 17092879-17095639 |
AT3G46450.2 | 2085 | Chr3: 17092938-17095639 |
AT3G46460.1 | 1065 | Chr3: 17095706-17097465 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G46450:three_prime_UTR:4 | 449 | Chr3: 17092848-17093296 | Arabidopsis thaliana |
AT3G46450:three_prime_UTR:3 | 234 | Chr3: 17092879-17093112 | Arabidopsis thaliana |
AT3G46450:three_prime_UTR:1 | 11 | Chr3: 17093286-17093296 | Arabidopsis thaliana |
AT3G46450:three_prime_UTR:2 | 359 | Chr3: 17092938-17093296 | Arabidopsis thaliana |
AT3G46460:three_prime_UTR:2 | 414 | Chr3: 17095706-17096119 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...