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Gene : DOF6 A. thaliana

DB identifier  ? AT3G45610 Secondary Identifier  ? locus:2085697
Name  ? DOF transcription factor 6 Brief Description  Dof-type zinc finger DNA-binding family protein
TAIR Computational Description  Dof-type zinc finger DNA-binding family protein;(source:Araport11)
TAIR Curator Summary  PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division.
TAIR Short Description  Dof-type zinc finger DNA-binding family protein
TAIR Aliases  DOF6

1 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1300  
Location: Chr3:16739247-16740546 reverse strand

Gene models - DOF6 AT3G45610

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
DOF32_ARATH developmental stage The transcript levels of the gene accumulate in dry seeds and decay gradually during after-ripening and also upon seed imbibition.
DOF32_ARATH function Transcription factor that negatively affects seed germination and opposes TCP14 function in the regulation of a specific set of abscisic acid-related genes (PubMed:22155632). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969).
DOF32_ARATH tissue specificity The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) form a short-range concentration gradient that peaks at protophloem sieve elements (PSE).

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
transcription cis-regulatory region binding  ? ECO  
metal ion binding  ? ECO  
biological process
regulation of DNA-templated transcription  ? ECO  
root radial pattern formation  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets