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Gene : AT3G42160 A. thaliana

DB identifier  ? AT3G42160 Secondary Identifier  ? locus:2100804
Brief Description  Pectin lyase-like superfamily protein
TAIR Computational Description  Pectin lyase-like superfamily protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Pectin lyase-like superfamily protein

0 Gene Rifs

1 Organism

2 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1052  
Location: Chr3:14314583-14315634

Gene models - AT3G42160 AT3G42160

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
Q9M2N6_ARATH pathway Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
lyase activity  ? ECO  
pectinesterase activity  ? ECO  
biological process
pectin catabolic process  ? ECO  
cell wall modification  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets