External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 19, Exons: 16, Five Prime UTRs: 9, mRNAs: 6, Three Prime UTRs: 3, Transposable Elements: 6, Transposon Fragments: 7
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G29130:CDS:8 | 103 | Chr3: 11102546-11102648 | Arabidopsis thaliana |
AT3G29130:CDS:7 | 153 | Chr3: 11102723-11102875 | Arabidopsis thaliana |
AT3G29130:CDS:5 | 104 | Chr3: 11103191-11103294 | Arabidopsis thaliana |
AT3G29130:CDS:8.1 | 103 | Chr3: 11102546-11102648 | Arabidopsis thaliana |
AT3G29130:CDS:6 | 173 | Chr3: 11102723-11102895 | Arabidopsis thaliana |
AT3G29130:CDS:8.2 | 103 | Chr3: 11102546-11102648 | Arabidopsis thaliana |
AT3G29130:CDS:6.1 | 173 | Chr3: 11102723-11102895 | Arabidopsis thaliana |
AT3G29130:CDS:8.3 | 103 | Chr3: 11102546-11102648 | Arabidopsis thaliana |
AT3G29130:CDS:7.1 | 153 | Chr3: 11102723-11102875 | Arabidopsis thaliana |
AT3G29130:CDS:5.1 | 104 | Chr3: 11103191-11103294 | Arabidopsis thaliana |
AT3G29130:CDS:8.4 | 103 | Chr3: 11102546-11102648 | Arabidopsis thaliana |
AT3G29130:CDS:7.2 | 153 | Chr3: 11102723-11102875 | Arabidopsis thaliana |
AT3G29130:CDS:4 | 138 | Chr3: 11103191-11103328 | Arabidopsis thaliana |
AT3G29130:CDS:3 | 32 | Chr3: 11103400-11103431 | Arabidopsis thaliana |
AT3G29130:CDS:2 | 39 | Chr3: 11103551-11103589 | Arabidopsis thaliana |
AT3G29130:CDS:1 | 42 | Chr3: 11103806-11103847 | Arabidopsis thaliana |
AT3G29130:CDS:8.5 | 103 | Chr3: 11102546-11102648 | Arabidopsis thaliana |
AT3G29130:CDS:7.3 | 153 | Chr3: 11102723-11102875 | Arabidopsis thaliana |
AT3G29130:CDS:5.2 | 104 | Chr3: 11103191-11103294 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G29130:exon:7 | 319 | Chr3: 11103191-11103509 | Arabidopsis thaliana |
AT3G29130:exon:11 | 787 | Chr3: 11102723-11103509 | Arabidopsis thaliana |
AT3G29130:exon:16 | 3046 | Chr3: 11099603-11102648 | Arabidopsis thaliana |
AT3G29130:exon:12 | 613 | Chr3: 11102723-11103335 | Arabidopsis thaliana |
AT3G29130:exon:1 | 268 | Chr3: 11103806-11104073 | Arabidopsis thaliana |
AT3G29130:exon:8 | 241 | Chr3: 11103191-11103431 | Arabidopsis thaliana |
AT3G29130:exon:4 | 291 | Chr3: 11103590-11103880 | Arabidopsis thaliana |
AT3G29130:exon:15 | 377 | Chr3: 11102272-11102648 | Arabidopsis thaliana |
AT3G29130:exon:10 | 138 | Chr3: 11103191-11103328 | Arabidopsis thaliana |
AT3G29130:exon:6 | 32 | Chr3: 11103400-11103431 | Arabidopsis thaliana |
AT3G29130:exon:5 | 39 | Chr3: 11103551-11103589 | Arabidopsis thaliana |
AT3G29130:exon:2 | 101 | Chr3: 11103806-11103906 | Arabidopsis thaliana |
AT3G29130:exon:14 | 359 | Chr3: 11102290-11102648 | Arabidopsis thaliana |
AT3G29130:exon:13 | 153 | Chr3: 11102723-11102875 | Arabidopsis thaliana |
AT3G29130:exon:9 | 145 | Chr3: 11103191-11103335 | Arabidopsis thaliana |
AT3G29130:exon:3 | 47 | Chr3: 11103806-11103852 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G29130:five_prime_UTR:5 | 215 | Chr3: 11103295-11103509 | Arabidopsis thaliana |
AT3G29130:five_prime_UTR:8 | 614 | Chr3: 11102896-11103509 | Arabidopsis thaliana |
AT3G29130:five_prime_UTR:9 | 440 | Chr3: 11102896-11103335 | Arabidopsis thaliana |
AT3G29130:five_prime_UTR:2 | 268 | Chr3: 11103806-11104073 | Arabidopsis thaliana |
AT3G29130:five_prime_UTR:6 | 137 | Chr3: 11103295-11103431 | Arabidopsis thaliana |
AT3G29130:five_prime_UTR:4 | 291 | Chr3: 11103590-11103880 | Arabidopsis thaliana |
AT3G29130:five_prime_UTR:1 | 59 | Chr3: 11103848-11103906 | Arabidopsis thaliana |
AT3G29130:five_prime_UTR:7 | 41 | Chr3: 11103295-11103335 | Arabidopsis thaliana |
AT3G29130:five_prime_UTR:3 | 47 | Chr3: 11103806-11103852 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G29130.5 | 3518 | Chr3: 11099603-11103509 |
AT3G29130.4 | 3833 | Chr3: 11099603-11103509 |
AT3G29130.3 | 3927 | Chr3: 11099603-11104073 |
AT3G29130.6 | 1062 | Chr3: 11102272-11103880 |
AT3G29130.2 | 840 | Chr3: 11102272-11103906 |
AT3G29130.1 | 704 | Chr3: 11102290-11103852 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G29130:three_prime_UTR:3 | 2943 | Chr3: 11099603-11102545 | Arabidopsis thaliana |
AT3G29130:three_prime_UTR:2 | 274 | Chr3: 11102272-11102545 | Arabidopsis thaliana |
AT3G29130:three_prime_UTR:1 | 256 | Chr3: 11102290-11102545 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE46170 | 2367 | Chr3: 11097260-11099626 | Arabidopsis thaliana |
AT3TE46175 | 201 | Chr3: 11099819-11100019 | Arabidopsis thaliana |
AT3TE46180 | 314 | Chr3: 11100254-11100567 | Arabidopsis thaliana |
AT3TE46185 | 499 | Chr3: 11100724-11101222 | Arabidopsis thaliana |
AT3TE46190 | 21 | Chr3: 11101235-11101255 | Arabidopsis thaliana |
AT3TE46195 | 786 | Chr3: 11101256-11102041 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE46170:transposon_fragment:3 | 955 | Chr3: 11098672-11099626 | Arabidopsis thaliana |
AT3TE46175:transposon_fragment:1 | 201 | Chr3: 11099819-11100019 | Arabidopsis thaliana |
AT3TE46180:transposon_fragment:1 | 314 | Chr3: 11100254-11100567 | Arabidopsis thaliana |
AT3TE46185:transposon_fragment:1 | 499 | Chr3: 11100724-11101222 | Arabidopsis thaliana |
AT3TE46190:transposon_fragment:1 | 21 | Chr3: 11101235-11101255 | Arabidopsis thaliana |
AT3TE46195:transposon_fragment:1 | 579 | Chr3: 11101256-11101834 | Arabidopsis thaliana |
AT3TE46195:transposon_fragment:2 | 195 | Chr3: 11101847-11102041 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
Q9LVP5_ARATH F4J1T2_ARATH A0A1I9LNV2_ARATH | similarity | Belongs to the KXD1 family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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