External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Genome feature
| Region: |
gene
|
Length: |
1895
 |
| Location: | Chr3:10121234-10123128 | ||
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G27340:CDS:1 |
99
|
Chr3: 10121303-10121401 | Arabidopsis thaliana |
| AT3G27340:CDS:2 |
108
|
Chr3: 10121488-10121595 | Arabidopsis thaliana |
| AT3G27340:CDS:3 |
65
|
Chr3: 10122354-10122418 | Arabidopsis thaliana |
| AT3G27340:CDS:6 |
154
|
Chr3: 10122539-10122692 | Arabidopsis thaliana |
| AT3G27340:CDS:1.1 |
99
|
Chr3: 10121303-10121401 | Arabidopsis thaliana |
| AT3G27340:CDS:2.1 |
108
|
Chr3: 10121488-10121595 | Arabidopsis thaliana |
| AT3G27340:CDS:4 |
150
|
Chr3: 10122354-10122503 | Arabidopsis thaliana |
| AT3G27340:CDS:1.2 |
99
|
Chr3: 10121303-10121401 | Arabidopsis thaliana |
| AT3G27340:CDS:2.2 |
108
|
Chr3: 10121488-10121595 | Arabidopsis thaliana |
| AT3G27340:CDS:3.1 |
65
|
Chr3: 10122354-10122418 | Arabidopsis thaliana |
| AT3G27340:CDS:5 |
19
|
Chr3: 10122532-10122550 | Arabidopsis thaliana |
| AT3G27340:CDS:1.3 |
99
|
Chr3: 10121303-10121401 | Arabidopsis thaliana |
| AT3G27340:CDS:2.3 |
108
|
Chr3: 10121488-10121595 | Arabidopsis thaliana |
| AT3G27340:CDS:3.2 |
65
|
Chr3: 10122354-10122418 | Arabidopsis thaliana |
| AT3G27340:CDS:7 |
130
|
Chr3: 10122563-10122692 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G27340:exon:7 |
590
|
Chr3: 10122539-10123128 | Arabidopsis thaliana |
| AT3G27340:exon:1 |
168
|
Chr3: 10121234-10121401 | Arabidopsis thaliana |
| AT3G27340:exon:5 |
775
|
Chr3: 10122354-10123128 | Arabidopsis thaliana |
| AT3G27340:exon:6 |
404
|
Chr3: 10122532-10122935 | Arabidopsis thaliana |
| AT3G27340:exon:2 |
113
|
Chr3: 10121289-10121401 | Arabidopsis thaliana |
| AT3G27340:exon:3 |
108
|
Chr3: 10121488-10121595 | Arabidopsis thaliana |
| AT3G27340:exon:4 |
65
|
Chr3: 10122354-10122418 | Arabidopsis thaliana |
| AT3G27340:exon:8 |
373
|
Chr3: 10122563-10122935 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G27340:five_prime_UTR:1 |
69
|
Chr3: 10121234-10121302 | Arabidopsis thaliana |
| AT3G27340:five_prime_UTR:2 |
14
|
Chr3: 10121289-10121302 | Arabidopsis thaliana |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT3G27340.1 |
931
|
Chr3: 10121234-10123128 |
| AT3G27340.4 |
1051
|
Chr3: 10121234-10123128 |
| AT3G27340.2 |
690
|
Chr3: 10121289-10122935 |
| AT3G27340.3 |
659
|
Chr3: 10121289-10122935 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT3G27340:three_prime_UTR:4 |
436
|
Chr3: 10122693-10123128 | Arabidopsis thaliana |
| AT3G27340:three_prime_UTR:1 |
625
|
Chr3: 10122504-10123128 | Arabidopsis thaliana |
| AT3G27340:three_prime_UTR:2 |
385
|
Chr3: 10122551-10122935 | Arabidopsis thaliana |
| AT3G27340:three_prime_UTR:3 |
243
|
Chr3: 10122693-10122935 | Arabidopsis thaliana |
Function
Gene Ontology
| cellular component | |
|---|---|
| No terms in this category. | |
| molecular function | |
|
metal ion binding
|
ECO |
| biological process | |
| No terms in this category. | |
Expression
BAR Webservices
Co-expression
|
Querying ATTED Service...
Data Source: ATTED-II |
|---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...
