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Gene : CCL A. thaliana

DB identifier  ? AT3G26740 Secondary Identifier  ? locus:2090837
Name  ? CCR-like Brief Description  CCR-like protein
TAIR Computational Description  CCR-like protein;(source:Araport11)
TAIR Curator Summary  transcripts are differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.
TAIR Short Description  CCR-like
TAIR Aliases  CCL

2 Gene Rifs

1 Organism

22 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1236  
Location: Chr3:9827682-9828917

Gene models - CCL AT3G26740

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
LIRP1_ARATH LIRP1_ARATH-2 function Thylakoid-determinant subunit of high molecular weight LFNRs-containing protein complexes.

2 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
chloroplast envelope  ? ECO  
chloroplast stroma  ? ECO  
chloroplast thylakoid membrane protein complex  ? ECO  
chloroplast  ? ECO  
molecular function
No terms in this category.
biological process
circadian rhythm  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets