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Gene : CHUP1 A. thaliana

DB identifier  ? AT3G25690 Secondary Identifier  ? locus:2102385
Name  ? CHLOROPLAST UNUSUAL POSITIONING 1 Brief Description  Hydroxyproline-rich glycoprotein family protein
TAIR Computational Description  Hydroxyproline-rich glycoprotein family protein;(source:Araport11)
TAIR Curator Summary  actin binding protein required for normal chloroplast positioning The mRNA is cell-to-cell mobile.
TAIR Short Description  Hydroxyproline-rich glycoprotein family protein
TAIR Aliases  AtCHUP1, CHUP1

6 Gene Rifs

1 Organism

26 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5510  
Location: Chr3:9352444-9357953

Gene models - CHUP1 AT3G25690

? Gene models

Transcripts: 6  Exons: 61  Introns: 55 

Overlapping Features

? Genome features that overlap coordinates of this Gene

23 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CHUP1_ARATH function Required for the positioning and movement of chloroplasts. Interacts with profilin and actin independent of its polymerization status. Regulates chloroplast localization by anchoring chloroplasts to the plasma membrane and forming a bridge to the actin cytoskeleton.
CHUP1_ARATH tissue specificity Expressed in cauline leaves, rosette leaves, stems and flowers, but not in roots.

3 Proteins

Function

Gene Ontology

cellular component
chloroplast outer membrane  ? ECO  
cytosol  ? ECO  
chloroplast  ? ECO  
molecular function
No terms in this category.
biological process
chloroplast organization  ? ECO  
chloroplast relocation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets