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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G25150:CDS:13 | 296 | Chr3: 9157161-9157456 | Arabidopsis thaliana |
AT3G25150:CDS:12 | 64 | Chr3: 9157541-9157604 | Arabidopsis thaliana |
AT3G25150:CDS:11 | 60 | Chr3: 9157688-9157747 | Arabidopsis thaliana |
AT3G25150:CDS:10 | 122 | Chr3: 9157837-9157958 | Arabidopsis thaliana |
AT3G25150:CDS:9 | 178 | Chr3: 9158042-9158219 | Arabidopsis thaliana |
AT3G25150:CDS:8 | 266 | Chr3: 9158329-9158594 | Arabidopsis thaliana |
AT3G25150:CDS:7 | 289 | Chr3: 9158712-9159000 | Arabidopsis thaliana |
AT3G25150:CDS:6 | 138 | Chr3: 9159085-9159222 | Arabidopsis thaliana |
AT3G25150:CDS:5 | 54 | Chr3: 9159309-9159362 | Arabidopsis thaliana |
AT3G25150:CDS:13.1 | 296 | Chr3: 9157161-9157456 | Arabidopsis thaliana |
AT3G25150:CDS:12.1 | 64 | Chr3: 9157541-9157604 | Arabidopsis thaliana |
AT3G25150:CDS:11.1 | 60 | Chr3: 9157688-9157747 | Arabidopsis thaliana |
AT3G25150:CDS:10.1 | 122 | Chr3: 9157837-9157958 | Arabidopsis thaliana |
AT3G25150:CDS:9.1 | 178 | Chr3: 9158042-9158219 | Arabidopsis thaliana |
AT3G25150:CDS:8.1 | 266 | Chr3: 9158329-9158594 | Arabidopsis thaliana |
AT3G25150:CDS:7.1 | 289 | Chr3: 9158712-9159000 | Arabidopsis thaliana |
AT3G25150:CDS:6.1 | 138 | Chr3: 9159085-9159222 | Arabidopsis thaliana |
AT3G25150:CDS:4 | 57 | Chr3: 9159309-9159365 | Arabidopsis thaliana |
AT3G25150:CDS:3 | 106 | Chr3: 9159537-9159642 | Arabidopsis thaliana |
AT3G25150:CDS:2 | 166 | Chr3: 9159758-9159923 | Arabidopsis thaliana |
AT3G25150:CDS:1 | 22 | Chr3: 9160031-9160052 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G25140:exon:3 | 646 | Chr3: 9156367-9157012 | Arabidopsis thaliana |
AT3G25150:exon:15 | 635 | Chr3: 9156822-9157456 | Arabidopsis thaliana |
AT3G25150:exon:5 | 68 | Chr3: 9159309-9159376 | Arabidopsis thaliana |
AT3G25150:exon:2 | 171 | Chr3: 9159758-9159928 | Arabidopsis thaliana |
AT3G25150:exon:14 | 379 | Chr3: 9157078-9157456 | Arabidopsis thaliana |
AT3G25150:exon:13 | 64 | Chr3: 9157541-9157604 | Arabidopsis thaliana |
AT3G25150:exon:12 | 60 | Chr3: 9157688-9157747 | Arabidopsis thaliana |
AT3G25150:exon:11 | 122 | Chr3: 9157837-9157958 | Arabidopsis thaliana |
AT3G25150:exon:10 | 178 | Chr3: 9158042-9158219 | Arabidopsis thaliana |
AT3G25150:exon:9 | 266 | Chr3: 9158329-9158594 | Arabidopsis thaliana |
AT3G25150:exon:8 | 289 | Chr3: 9158712-9159000 | Arabidopsis thaliana |
AT3G25150:exon:7 | 138 | Chr3: 9159085-9159222 | Arabidopsis thaliana |
AT3G25150:exon:6 | 57 | Chr3: 9159309-9159365 | Arabidopsis thaliana |
AT3G25150:exon:4 | 106 | Chr3: 9159537-9159642 | Arabidopsis thaliana |
AT3G25150:exon:3 | 166 | Chr3: 9159758-9159923 | Arabidopsis thaliana |
AT3G25150:exon:1 | 70 | Chr3: 9160031-9160100 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G25150:five_prime_UTR:3 | 14 | Chr3: 9159363-9159376 | Arabidopsis thaliana |
AT3G25150:five_prime_UTR:2 | 171 | Chr3: 9159758-9159928 | Arabidopsis thaliana |
AT3G25150:five_prime_UTR:1 | 48 | Chr3: 9160053-9160100 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G25140 | locus:2090210 | QUA1 | QUASIMODO 1 | 2505 | Chr3: 9154508-9157012 | A. thaliana | Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) | Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content. The mRNA is cell-to-cell mobile. | Nucleotide-diphospho-sugar transferases superfamily protein | GAUT8, QUA1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G25140.1 | 2290 | Chr3: 9154508-9157012 |
AT3G25150.1 | 1991 | Chr3: 9156822-9159928 |
AT3G25150.2 | 1895 | Chr3: 9157078-9160100 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G25140:three_prime_UTR:1 | 370 | Chr3: 9156643-9157012 | Arabidopsis thaliana |
AT3G25150:three_prime_UTR:2 | 339 | Chr3: 9156822-9157160 | Arabidopsis thaliana |
AT3G25150:three_prime_UTR:1 | 83 | Chr3: 9157078-9157160 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
cytosol | ECO |
molecular function | |
mRNA binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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