help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : IAA2 A. thaliana

DB identifier  ? AT3G23030 Secondary Identifier  ? locus:2094578
Name  ? indole-3-acetic acid inducible 2 Brief Description  indole-3-acetic acid inducible 2
TAIR Computational Description  indole-3-acetic acid inducible 2;(source:Araport11)
TAIR Curator Summary  auxin inducible gene expressed in the nucleus
TAIR Short Description  indole-3-acetic acid inducible 2
TAIR Aliases  IAA2

1 Gene Rifs

1 Organism

28 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1450  
Location: Chr3:8180646-8182095 reverse strand

Gene models - IAA2 AT3G23030

? Gene models

Transcripts: 2  Exons: 4  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A1I9LQ54_ARATH function Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
IAA2_ARATH function Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
A0A1I9LQ54_ARATH IAA2_ARATH similarity Belongs to the Aux/IAA family.
IAA2_ARATH tissue specificity Preferentially expressed in vegetative organs.

2 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
identical protein binding  ? ECO  
DNA-binding transcription factor activity  ? ECO  
transcription cis-regulatory region binding  ? ECO  
biological process
response to auxin  ? ECO  
auxin-activated signaling pathway  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets