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Gene : LFR A. thaliana

DB identifier  ? AT3G22990 Secondary Identifier  ? locus:2094618
Name  ? LEAF AND FLOWER RELATED Brief Description  ARM repeat superfamily protein
TAIR Computational Description  ARM repeat superfamily protein;(source:Araport11)
TAIR Curator Summary  Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues. LFR is functionally associated with AS2 to mediate leaf development.A subunit shared by SYD- and MINU1/2-associated SWI/SNF complexes (PMID:36471048).
TAIR Short Description  ARM repeat superfamily protein
TAIR Aliases  LFR

1 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2410  
Location: Chr3:8163941-8166350

Gene models - LFR AT3G22990

? Gene models

Transcripts: 1  Exons: 8  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
LFR_ARATH function Involved in leaf and flower development (PubMed:18846319). Plays roles in leaf development partly by associating with AS2 and repressing KNAT1/BP transcription (PubMed:29775508). Required for the formation of anther cell layers and normal expression of genes that regulates anther development (PubMed:22461668).
LFR_ARATH subcellular location Tends to cluster in the nucleus as discrete rounded speckles.
LFR_ARATH tissue specificity Expressed in roots, leaves, stems and flowers.

1 Proteins

Function

Gene Ontology

cellular component
brahma complex  ? ECO  
nucleus  ? ECO  
SWI/SNF complex  ? ECO  
molecular function
No terms in this category.
biological process
anther development  ? ECO  
regulation of nuclear division  ? ECO  
leaf development  ? ECO  
regulation of endosperm development  ? ECO  
chromatin remodeling  ? ECO  
embryo development ending in seed dormancy  ? ECO  
flower development  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets