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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G22420:CDS:1 | 288 | Chr3: 7946439-7946726 | Arabidopsis thaliana |
AT3G22420:CDS:3 | 38 | Chr3: 7946806-7946843 | Arabidopsis thaliana |
AT3G22420:CDS:4 | 228 | Chr3: 7947004-7947231 | Arabidopsis thaliana |
AT3G22420:CDS:5 | 221 | Chr3: 7947339-7947559 | Arabidopsis thaliana |
AT3G22420:CDS:7 | 158 | Chr3: 7947656-7947813 | Arabidopsis thaliana |
AT3G22420:CDS:8 | 373 | Chr3: 7947891-7948263 | Arabidopsis thaliana |
AT3G22420:CDS:10 | 614 | Chr3: 7948345-7948958 | Arabidopsis thaliana |
AT3G22420:CDS:1.1 | 288 | Chr3: 7946439-7946726 | Arabidopsis thaliana |
AT3G22420:CDS:3.1 | 38 | Chr3: 7946806-7946843 | Arabidopsis thaliana |
AT3G22420:CDS:4.1 | 228 | Chr3: 7947004-7947231 | Arabidopsis thaliana |
AT3G22420:CDS:5.1 | 221 | Chr3: 7947339-7947559 | Arabidopsis thaliana |
AT3G22420:CDS:7.1 | 158 | Chr3: 7947656-7947813 | Arabidopsis thaliana |
AT3G22420:CDS:9 | 1068 | Chr3: 7947891-7948958 | Arabidopsis thaliana |
AT3G22420:CDS:2 | 75 | Chr3: 7946652-7946726 | Arabidopsis thaliana |
AT3G22420:CDS:3.2 | 38 | Chr3: 7946806-7946843 | Arabidopsis thaliana |
AT3G22420:CDS:4.2 | 228 | Chr3: 7947004-7947231 | Arabidopsis thaliana |
AT3G22420:CDS:5.2 | 221 | Chr3: 7947339-7947559 | Arabidopsis thaliana |
AT3G22420:CDS:7.2 | 158 | Chr3: 7947656-7947813 | Arabidopsis thaliana |
AT3G22420:CDS:9.1 | 1068 | Chr3: 7947891-7948958 | Arabidopsis thaliana |
AT3G22420:CDS:2.1 | 75 | Chr3: 7946652-7946726 | Arabidopsis thaliana |
AT3G22420:CDS:3.3 | 38 | Chr3: 7946806-7946843 | Arabidopsis thaliana |
AT3G22420:CDS:4.3 | 228 | Chr3: 7947004-7947231 | Arabidopsis thaliana |
AT3G22420:CDS:5.3 | 221 | Chr3: 7947339-7947559 | Arabidopsis thaliana |
AT3G22420:CDS:7.3 | 158 | Chr3: 7947656-7947813 | Arabidopsis thaliana |
AT3G22420:CDS:8.1 | 373 | Chr3: 7947891-7948263 | Arabidopsis thaliana |
AT3G22420:CDS:10.1 | 614 | Chr3: 7948345-7948958 | Arabidopsis thaliana |
AT3G22420:CDS:2.2 | 75 | Chr3: 7946652-7946726 | Arabidopsis thaliana |
AT3G22420:CDS:3.4 | 38 | Chr3: 7946806-7946843 | Arabidopsis thaliana |
AT3G22420:CDS:4.4 | 228 | Chr3: 7947004-7947231 | Arabidopsis thaliana |
AT3G22420:CDS:6 | 475 | Chr3: 7947339-7947813 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G22420:exon:13 | 766 | Chr3: 7948345-7949110 | Arabidopsis thaliana |
AT3G22420:exon:1 | 319 | Chr3: 7946408-7946726 | Arabidopsis thaliana |
AT3G22420:exon:11 | 1220 | Chr3: 7947891-7949110 | Arabidopsis thaliana |
AT3G22420:exon:12 | 1287 | Chr3: 7947891-7949177 | Arabidopsis thaliana |
AT3G22420:exon:2 | 232 | Chr3: 7946495-7946726 | Arabidopsis thaliana |
AT3G22420:exon:6 | 221 | Chr3: 7947339-7947559 | Arabidopsis thaliana |
AT3G22420:exon:8 | 158 | Chr3: 7947656-7947813 | Arabidopsis thaliana |
AT3G22420:exon:15 | 833 | Chr3: 7948345-7949177 | Arabidopsis thaliana |
AT3G22420:exon:10 | 1219 | Chr3: 7947891-7949109 | Arabidopsis thaliana |
AT3G22420:exon:3 | 201 | Chr3: 7946526-7946726 | Arabidopsis thaliana |
AT3G22420:exon:4 | 38 | Chr3: 7946806-7946843 | Arabidopsis thaliana |
AT3G22420:exon:5 | 228 | Chr3: 7947004-7947231 | Arabidopsis thaliana |
AT3G22420:exon:7 | 475 | Chr3: 7947339-7947813 | Arabidopsis thaliana |
AT3G22420:exon:9 | 373 | Chr3: 7947891-7948263 | Arabidopsis thaliana |
AT3G22420:exon:14 | 805 | Chr3: 7948345-7949149 | Arabidopsis thaliana |
AT3G22421:exon:1 | 1335 | Chr3: 7949106-7950440 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G22420:five_prime_UTR:1 | 31 | Chr3: 7946408-7946438 | Arabidopsis thaliana |
AT3G22420:five_prime_UTR:2 | 157 | Chr3: 7946495-7946651 | Arabidopsis thaliana |
AT3G22420:five_prime_UTR:3 | 126 | Chr3: 7946526-7946651 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G22421 | locus:504955766 | AT3G22421 | 1335 | Chr3: 7949106-7950440 | A. thaliana | F-box/associated interaction domain protein;(source:Araport11) | NULL | F-box and associated interaction domains-containing protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G22420.4 | 2103 | Chr3: 7946408-7949110 |
AT3G22420.3 | 2184 | Chr3: 7946408-7949110 |
AT3G22420.5 | 2164 | Chr3: 7946495-7949177 |
AT3G22420.1 | 2083 | Chr3: 7946495-7949177 |
AT3G22420.2 | 2161 | Chr3: 7946526-7949109 |
AT3G22420.6 | 2120 | Chr3: 7946526-7949149 |
AT3G22421.1 | 1335 | Chr3: 7949106-7950440 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G22420:three_prime_UTR:2 | 152 | Chr3: 7948959-7949110 | Arabidopsis thaliana |
AT3G22420:three_prime_UTR:4 | 219 | Chr3: 7948959-7949177 | Arabidopsis thaliana |
AT3G22420:three_prime_UTR:1 | 151 | Chr3: 7948959-7949109 | Arabidopsis thaliana |
AT3G22420:three_prime_UTR:3 | 191 | Chr3: 7948959-7949149 | Arabidopsis thaliana |
AT3G22421:three_prime_UTR:1 | 10 | Chr3: 7949106-7949115 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
WNK2_ARATH-2 WNK2_ARATH | function | Regulates flowering time by modulating the photoperiod pathway. Possesses kinase activity in vitro. |
WNK2_ARATH-2 WNK2_ARATH | similarity | Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
histone H2AS1 kinase activity | ECO |
protein serine kinase activity | ECO |
protein kinase activity | ECO |
biological process | |
protein phosphorylation | ECO |
photoperiodism, flowering | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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