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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G21250:CDS:16 | 122 | Chr3: 7457668-7457789 | Arabidopsis thaliana |
AT3G21250:CDS:15 | 240 | Chr3: 7457875-7458114 | Arabidopsis thaliana |
AT3G21250:CDS:14 | 64 | Chr3: 7458203-7458266 | Arabidopsis thaliana |
AT3G21250:CDS:13 | 306 | Chr3: 7458344-7458649 | Arabidopsis thaliana |
AT3G21250:CDS:12 | 215 | Chr3: 7458732-7458946 | Arabidopsis thaliana |
AT3G21250:CDS:11 | 295 | Chr3: 7459100-7459394 | Arabidopsis thaliana |
AT3G21250:CDS:10 | 165 | Chr3: 7459481-7459645 | Arabidopsis thaliana |
AT3G21250:CDS:9 | 612 | Chr3: 7459723-7460334 | Arabidopsis thaliana |
AT3G21250:CDS:7 | 54 | Chr3: 7460455-7460508 | Arabidopsis thaliana |
AT3G21250:CDS:6 | 321 | Chr3: 7460583-7460903 | Arabidopsis thaliana |
AT3G21250:CDS:4 | 1952 | Chr3: 7461001-7462952 | Arabidopsis thaliana |
AT3G21250:CDS:2 | 16 | Chr3: 7463246-7463261 | Arabidopsis thaliana |
AT3G21250:CDS:16.1 | 122 | Chr3: 7457668-7457789 | Arabidopsis thaliana |
AT3G21250:CDS:15.1 | 240 | Chr3: 7457875-7458114 | Arabidopsis thaliana |
AT3G21250:CDS:14.1 | 64 | Chr3: 7458203-7458266 | Arabidopsis thaliana |
AT3G21250:CDS:13.1 | 306 | Chr3: 7458344-7458649 | Arabidopsis thaliana |
AT3G21250:CDS:12.1 | 215 | Chr3: 7458732-7458946 | Arabidopsis thaliana |
AT3G21250:CDS:11.1 | 295 | Chr3: 7459100-7459394 | Arabidopsis thaliana |
AT3G21250:CDS:10.1 | 165 | Chr3: 7459481-7459645 | Arabidopsis thaliana |
AT3G21250:CDS:9.1 | 612 | Chr3: 7459723-7460334 | Arabidopsis thaliana |
AT3G21250:CDS:8 | 87 | Chr3: 7460422-7460508 | Arabidopsis thaliana |
AT3G21250:CDS:6.1 | 321 | Chr3: 7460583-7460903 | Arabidopsis thaliana |
AT3G21250:CDS:5 | 603 | Chr3: 7461001-7461603 | Arabidopsis thaliana |
AT3G21250:CDS:3 | 117 | Chr3: 7461693-7461809 | Arabidopsis thaliana |
AT3G21250:CDS:16.2 | 122 | Chr3: 7457668-7457789 | Arabidopsis thaliana |
AT3G21250:CDS:15.2 | 240 | Chr3: 7457875-7458114 | Arabidopsis thaliana |
AT3G21250:CDS:14.2 | 64 | Chr3: 7458203-7458266 | Arabidopsis thaliana |
AT3G21250:CDS:13.2 | 306 | Chr3: 7458344-7458649 | Arabidopsis thaliana |
AT3G21250:CDS:12.2 | 215 | Chr3: 7458732-7458946 | Arabidopsis thaliana |
AT3G21250:CDS:11.2 | 295 | Chr3: 7459100-7459394 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G21250:exon:4 | 280 | Chr3: 7463246-7463525 | Arabidopsis thaliana |
AT3G21250:exon:9 | 54 | Chr3: 7460455-7460508 | Arabidopsis thaliana |
AT3G21250:exon:2 | 170 | Chr3: 7463356-7463525 | Arabidopsis thaliana |
AT3G21250:exon:7 | 603 | Chr3: 7461001-7461603 | Arabidopsis thaliana |
AT3G21250:exon:5 | 1260 | Chr3: 7461693-7462952 | Arabidopsis thaliana |
AT3G21250:exon:3 | 399 | Chr3: 7463246-7463644 | Arabidopsis thaliana |
AT3G21250:exon:18 | 357 | Chr3: 7457433-7457789 | Arabidopsis thaliana |
AT3G21250:exon:17 | 240 | Chr3: 7457875-7458114 | Arabidopsis thaliana |
AT3G21250:exon:16 | 64 | Chr3: 7458203-7458266 | Arabidopsis thaliana |
AT3G21250:exon:15 | 306 | Chr3: 7458344-7458649 | Arabidopsis thaliana |
AT3G21250:exon:14 | 215 | Chr3: 7458732-7458946 | Arabidopsis thaliana |
AT3G21250:exon:13 | 295 | Chr3: 7459100-7459394 | Arabidopsis thaliana |
AT3G21250:exon:12 | 165 | Chr3: 7459481-7459645 | Arabidopsis thaliana |
AT3G21250:exon:11 | 612 | Chr3: 7459723-7460334 | Arabidopsis thaliana |
AT3G21250:exon:10 | 87 | Chr3: 7460422-7460508 | Arabidopsis thaliana |
AT3G21250:exon:8 | 321 | Chr3: 7460583-7460903 | Arabidopsis thaliana |
AT3G21250:exon:6 | 1952 | Chr3: 7461001-7462952 | Arabidopsis thaliana |
AT3G21250:exon:1 | 289 | Chr3: 7463356-7463644 | Arabidopsis thaliana |
AT3G04085:exon:1 | 255 | Chr3: 7462804-7463058 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G21250:five_prime_UTR:5 | 264 | Chr3: 7463262-7463525 | Arabidopsis thaliana |
AT3G21250:five_prime_UTR:3 | 170 | Chr3: 7463356-7463525 | Arabidopsis thaliana |
AT3G21250:five_prime_UTR:2 | 136 | Chr3: 7463390-7463525 | Arabidopsis thaliana |
AT3G21250:five_prime_UTR:7 | 1143 | Chr3: 7461810-7462952 | Arabidopsis thaliana |
AT3G21250:five_prime_UTR:6 | 399 | Chr3: 7463246-7463644 | Arabidopsis thaliana |
AT3G21250:five_prime_UTR:4 | 383 | Chr3: 7463262-7463644 | Arabidopsis thaliana |
AT3G21250:five_prime_UTR:1 | 255 | Chr3: 7463390-7463644 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G04085 | AT3G04085 | 255 | Chr3: 7462804-7463058 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G21250.1 | 4861 | Chr3: 7457433-7463525 |
AT3G21250.6 | 4695 | Chr3: 7457433-7463525 |
AT3G21250.5 | 4751 | Chr3: 7457433-7463525 |
AT3G21250.3 | 4924 | Chr3: 7457433-7463644 |
AT3G21250.2 | 5013 | Chr3: 7457433-7463644 |
AT3G21250.4 | 4903 | Chr3: 7457433-7463644 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G21250:three_prime_UTR:1 | 235 | Chr3: 7457433-7457667 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
AB8C_ARATH AB8C_ARATH-2 | function | Pump for glutathione S-conjugates. |
A0A1I9LPV3_ARATH A0A1I9LPV6_ARATH A0A1I9LPV5_ARATH AB8C_ARATH AB8C_ARATH-2 | similarity | Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily. |
AB8C_ARATH AB8C_ARATH-2 | tissue specificity | Ubiquitous. |
Function
Gene Ontology
cellular component | |
---|---|
plant-type vacuole | ECO |
cytosol | ECO |
membrane | ECO |
vacuolar membrane | ECO |
molecular function | |
ATPase-coupled transmembrane transporter activity | ECO |
ABC-type xenobiotic transporter activity | ECO |
ATP hydrolysis activity | ECO |
ATP binding | ECO |
biological process | |
transmembrane transport | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...