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Gene : CPL5 A. thaliana

DB identifier  ? AT3G19600 Secondary Identifier  ? locus:2091221
Name  ? C-terminal domain phosphatase-like 5 Brief Description  RNA polymerase II carboxy-terminal domain phosphatase-like protein
TAIR Computational Description  RNA polymerase II carboxy-terminal domain phosphatase-like protein;(source:Araport11)
TAIR Curator Summary  Encodes a Ser-2-specific RNAPII CTD phosphatase with two tandem-repeated CTD phosphatase domains that belongs to the group III CTD phosphatase-like (CPL) family. It positively regulates ABA and drought responses.
TAIR Short Description  Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
TAIR Aliases  AtCPL5, CPL5

2 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3224  
Location: Chr3:6808585-6811808 reverse strand

Gene models - CPL5 AT3G19600

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CPL5_ARATH developmental stage In the vegetative stage, first detected in the seed coat upon germination and in the hypocotyl of young seedlings. In seedlings, expressed in roots (mostly in primary roots), hypocotyl, rosette leaves and cotyledons. In rosette leaves, observed in the vascular tissue of major veins, guard cells and trichomes. During the reproductive stage, expressed in flower buds, stems, stamens, carpels and funiculi of siliques.
CPL5_ARATH function Mediates the dephosphorylation of 'Ser-2' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1). This promotes the activity of RNA polymerase II. Positively regulates abscisic acid (ABA) and drought responses, including the regulation of specific genes expression.
CPL5_ARATH tissue specificity Expressed in roots, seedlings, hypocotyls, cotyledons, leaves, siliques and flowers.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
RNA polymerase II CTD heptapeptide repeat phosphatase activity  ? ECO  
myosin phosphatase activity  ? ECO  
biological process
abscisic acid-activated signaling pathway  ? ECO  
response to abscisic acid  ? ECO  
response to cold  ? ECO  
response to salt  ? ECO  
response to water deprivation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets