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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G19520:CDS:1 | 81 | Chr3: 6772773-6772853 | Arabidopsis thaliana |
AT3G19520:CDS:2 | 147 | Chr3: 6772948-6773094 | Arabidopsis thaliana |
AT3G19520:CDS:3 | 196 | Chr3: 6773232-6773427 | Arabidopsis thaliana |
AT3G19520:CDS:4 | 125 | Chr3: 6773501-6773625 | Arabidopsis thaliana |
AT3G19520:CDS:5 | 87 | Chr3: 6773716-6773802 | Arabidopsis thaliana |
AT3G19520:CDS:7 | 336 | Chr3: 6773874-6774209 | Arabidopsis thaliana |
AT3G19520:CDS:1.1 | 81 | Chr3: 6772773-6772853 | Arabidopsis thaliana |
AT3G19520:CDS:2.1 | 147 | Chr3: 6772948-6773094 | Arabidopsis thaliana |
AT3G19520:CDS:3.1 | 196 | Chr3: 6773232-6773427 | Arabidopsis thaliana |
AT3G19520:CDS:4.1 | 125 | Chr3: 6773501-6773625 | Arabidopsis thaliana |
AT3G19520:CDS:5.1 | 87 | Chr3: 6773716-6773802 | Arabidopsis thaliana |
AT3G19520:CDS:8 | 303 | Chr3: 6773907-6774209 | Arabidopsis thaliana |
AT3G19520:CDS:1.2 | 81 | Chr3: 6772773-6772853 | Arabidopsis thaliana |
AT3G19520:CDS:2.2 | 147 | Chr3: 6772948-6773094 | Arabidopsis thaliana |
AT3G19520:CDS:3.2 | 196 | Chr3: 6773232-6773427 | Arabidopsis thaliana |
AT3G19520:CDS:4.2 | 125 | Chr3: 6773501-6773625 | Arabidopsis thaliana |
AT3G19520:CDS:6 | 126 | Chr3: 6773716-6773841 | Arabidopsis thaliana |
AT3G19520:CDS:1.3 | 81 | Chr3: 6772773-6772853 | Arabidopsis thaliana |
AT3G19520:CDS:2.3 | 147 | Chr3: 6772948-6773094 | Arabidopsis thaliana |
AT3G19520:CDS:3.3 | 196 | Chr3: 6773232-6773427 | Arabidopsis thaliana |
AT3G19520:CDS:4.3 | 125 | Chr3: 6773501-6773625 | Arabidopsis thaliana |
AT3G19520:CDS:5.2 | 87 | Chr3: 6773716-6773802 | Arabidopsis thaliana |
AT3G19520:CDS:8.1 | 303 | Chr3: 6773907-6774209 | Arabidopsis thaliana |
AT3G19530:CDS:1 | 285 | Chr3: 6775265-6775549 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G19520:exon:1 | 284 | Chr3: 6772570-6772853 | Arabidopsis thaliana |
AT3G19520:exon:9 | 572 | Chr3: 6773874-6774445 | Arabidopsis thaliana |
AT3G19520:exon:11 | 632 | Chr3: 6773907-6774538 | Arabidopsis thaliana |
AT3G19520:exon:2 | 210 | Chr3: 6772644-6772853 | Arabidopsis thaliana |
AT3G19520:exon:8 | 823 | Chr3: 6773716-6774538 | Arabidopsis thaliana |
AT3G19520:exon:3 | 167 | Chr3: 6772687-6772853 | Arabidopsis thaliana |
AT3G19520:exon:4 | 147 | Chr3: 6772948-6773094 | Arabidopsis thaliana |
AT3G19520:exon:5 | 196 | Chr3: 6773232-6773427 | Arabidopsis thaliana |
AT3G19520:exon:6 | 125 | Chr3: 6773501-6773625 | Arabidopsis thaliana |
AT3G19520:exon:7 | 87 | Chr3: 6773716-6773802 | Arabidopsis thaliana |
AT3G19520:exon:10 | 361 | Chr3: 6773907-6774267 | Arabidopsis thaliana |
AT3G19520:exon:12 | 158 | Chr3: 6775288-6775445 | Arabidopsis thaliana |
AT3G19530:exon:3 | 54 | Chr3: 6774970-6775023 | Arabidopsis thaliana |
AT3G19530:exon:2 | 498 | Chr3: 6775171-6775668 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G19520:five_prime_UTR:1 | 203 | Chr3: 6772570-6772772 | Arabidopsis thaliana |
AT3G19520:five_prime_UTR:2 | 129 | Chr3: 6772644-6772772 | Arabidopsis thaliana |
AT3G19520:five_prime_UTR:3 | 86 | Chr3: 6772687-6772772 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G19530 | locus:2101505 | AT3G19530 | 879 | Chr3: 6774970-6775848 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G19520.3 | 1411 | Chr3: 6772570-6774445 |
AT3G19520.1 | 1397 | Chr3: 6772644-6774538 |
AT3G19520.4 | 1501 | Chr3: 6772644-6774538 |
AT3G19520.2 | 1241 | Chr3: 6772687-6775445 |
AT3G19530.1 | 632 | Chr3: 6774970-6775848 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G19520:three_prime_UTR:3 | 236 | Chr3: 6774210-6774445 | Arabidopsis thaliana |
AT3G19520:three_prime_UTR:4 | 329 | Chr3: 6774210-6774538 | Arabidopsis thaliana |
AT3G19520:three_prime_UTR:1 | 697 | Chr3: 6773842-6774538 | Arabidopsis thaliana |
AT3G19520:three_prime_UTR:2 | 58 | Chr3: 6774210-6774267 | Arabidopsis thaliana |
AT3G19520:three_prime_UTR:5 | 158 | Chr3: 6775288-6775445 | Arabidopsis thaliana |
AT3G19530:three_prime_UTR:2 | 54 | Chr3: 6774970-6775023 | Arabidopsis thaliana |
AT3G19530:three_prime_UTR:1 | 94 | Chr3: 6775171-6775264 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1I9LTD3_ARATH Y3195_ARATH A0A1I9LTD4_ARATH | similarity | Belongs to the UPF0725 (EMB2204) family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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