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Gene : SCO2 A. thaliana

DB identifier  ? AT3G19220 Secondary Identifier  ? locus:2094093
Name  ? SNOWY COTYLEDON 2 Brief Description  protein disulfide isomerase
TAIR Computational Description  protein disulfide isomerase;(source:Araport11)
TAIR Curator Summary  Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.
TAIR Short Description  protein disulfide isomerases
TAIR Aliases  CYO1, SCO2

4 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1698  
Location: Chr3:6659155-6660852

Gene models - SCO2 AT3G19220

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SCO2_ARATH developmental stage Very low expression in etiolated seedlings, but gradual increase upon illumination with a maximum after 6 hours. Expressed mainly in young plants grown under light conditions.
SCO2_ARATH function Protein disulfide-isomerase involved in chloroplast development in cotyledons. Involved in the process of vesicle-derived thylakoid formation, probably at the level of the integration and folding of LHCB proteins at the initial location of integration. Acts only in germinating seeds after dormancy, during the transition from heterotrophic to autotrophic growth.
SCO2_ARATH subcellular location Associates with multiple thylakoid complexes.
SCO2_ARATH tissue specificity Expressed in roots, rosette and cauline leaves, stems, inflorescences and young siliques of light-grown plants, but not in etiolated seedlings or in senescing tissues.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast thylakoid membrane  ? ECO  
chloroplast  ? ECO  
molecular function
protein disulfide isomerase activity  ? ECO  
metal ion binding  ? ECO  
biological process
chloroplast organization  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets