External Links
- Aracyc
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- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
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- Plaza
- pep2pro
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G18900:CDS:1 | 38 | Chr3: 6517181-6517218 | Arabidopsis thaliana |
AT3G18900:CDS:2 | 67 | Chr3: 6517294-6517360 | Arabidopsis thaliana |
AT3G18900:CDS:3 | 93 | Chr3: 6517444-6517536 | Arabidopsis thaliana |
AT3G18900:CDS:5 | 114 | Chr3: 6517626-6517739 | Arabidopsis thaliana |
AT3G18900:CDS:7 | 336 | Chr3: 6517839-6518174 | Arabidopsis thaliana |
AT3G18900:CDS:8 | 281 | Chr3: 6518261-6518541 | Arabidopsis thaliana |
AT3G18900:CDS:9 | 100 | Chr3: 6518647-6518746 | Arabidopsis thaliana |
AT3G18900:CDS:10 | 60 | Chr3: 6518857-6518916 | Arabidopsis thaliana |
AT3G18900:CDS:12 | 99 | Chr3: 6519009-6519107 | Arabidopsis thaliana |
AT3G18900:CDS:1.1 | 38 | Chr3: 6517181-6517218 | Arabidopsis thaliana |
AT3G18900:CDS:2.1 | 67 | Chr3: 6517294-6517360 | Arabidopsis thaliana |
AT3G18900:CDS:3.1 | 93 | Chr3: 6517444-6517536 | Arabidopsis thaliana |
AT3G18900:CDS:5.1 | 114 | Chr3: 6517626-6517739 | Arabidopsis thaliana |
AT3G18900:CDS:7.1 | 336 | Chr3: 6517839-6518174 | Arabidopsis thaliana |
AT3G18900:CDS:8.1 | 281 | Chr3: 6518261-6518541 | Arabidopsis thaliana |
AT3G18900:CDS:9.1 | 100 | Chr3: 6518647-6518746 | Arabidopsis thaliana |
AT3G18900:CDS:10.1 | 60 | Chr3: 6518857-6518916 | Arabidopsis thaliana |
AT3G18900:CDS:11 | 87 | Chr3: 6519009-6519095 | Arabidopsis thaliana |
AT3G18900:CDS:14 | 219 | Chr3: 6519171-6519389 | Arabidopsis thaliana |
AT3G18900:CDS:6 | 69 | Chr3: 6517671-6517739 | Arabidopsis thaliana |
AT3G18900:CDS:7.2 | 336 | Chr3: 6517839-6518174 | Arabidopsis thaliana |
AT3G18900:CDS:8.2 | 281 | Chr3: 6518261-6518541 | Arabidopsis thaliana |
AT3G18900:CDS:9.2 | 100 | Chr3: 6518647-6518746 | Arabidopsis thaliana |
AT3G18900:CDS:10.2 | 60 | Chr3: 6518857-6518916 | Arabidopsis thaliana |
AT3G18900:CDS:11.1 | 87 | Chr3: 6519009-6519095 | Arabidopsis thaliana |
AT3G18900:CDS:13 | 129 | Chr3: 6519171-6519299 | Arabidopsis thaliana |
AT3G18900:CDS:15 | 288 | Chr3: 6519390-6519677 | Arabidopsis thaliana |
AT3G18900:CDS:1.2 | 38 | Chr3: 6517181-6517218 | Arabidopsis thaliana |
AT3G18900:CDS:2.2 | 67 | Chr3: 6517294-6517360 | Arabidopsis thaliana |
AT3G18900:CDS:3.2 | 93 | Chr3: 6517444-6517536 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G18900:exon:15 | 291 | Chr3: 6519009-6519299 | Arabidopsis thaliana |
AT3G18900:exon:1 | 328 | Chr3: 6516891-6517218 | Arabidopsis thaliana |
AT3G18900:exon:17 | 654 | Chr3: 6519171-6519824 | Arabidopsis thaliana |
AT3G18900:exon:2 | 257 | Chr3: 6516962-6517218 | Arabidopsis thaliana |
AT3G18900:exon:5 | 243 | Chr3: 6517294-6517536 | Arabidopsis thaliana |
AT3G18900:exon:19 | 457 | Chr3: 6519390-6519846 | Arabidopsis thaliana |
AT3G18900:exon:6 | 93 | Chr3: 6517444-6517536 | Arabidopsis thaliana |
AT3G18900:exon:3 | 247 | Chr3: 6516972-6517218 | Arabidopsis thaliana |
AT3G18900:exon:4 | 67 | Chr3: 6517294-6517360 | Arabidopsis thaliana |
AT3G18900:exon:7 | 78 | Chr3: 6517459-6517536 | Arabidopsis thaliana |
AT3G18900:exon:9 | 114 | Chr3: 6517626-6517739 | Arabidopsis thaliana |
AT3G18900:exon:20 | 517 | Chr3: 6519390-6519906 | Arabidopsis thaliana |
AT3G18900:exon:8 | 174 | Chr3: 6517566-6517739 | Arabidopsis thaliana |
AT3G18900:exon:10 | 336 | Chr3: 6517839-6518174 | Arabidopsis thaliana |
AT3G18900:exon:11 | 281 | Chr3: 6518261-6518541 | Arabidopsis thaliana |
AT3G18900:exon:12 | 100 | Chr3: 6518647-6518746 | Arabidopsis thaliana |
AT3G18900:exon:13 | 60 | Chr3: 6518857-6518916 | Arabidopsis thaliana |
AT3G18900:exon:14 | 87 | Chr3: 6519009-6519095 | Arabidopsis thaliana |
AT3G18900:exon:16 | 129 | Chr3: 6519171-6519299 | Arabidopsis thaliana |
AT3G18900:exon:18 | 435 | Chr3: 6519390-6519824 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G18900:five_prime_UTR:1 | 290 | Chr3: 6516891-6517180 | Arabidopsis thaliana |
AT3G18900:five_prime_UTR:2 | 257 | Chr3: 6516962-6517218 | Arabidopsis thaliana |
AT3G18900:five_prime_UTR:4 | 243 | Chr3: 6517294-6517536 | Arabidopsis thaliana |
AT3G18900:five_prime_UTR:6 | 45 | Chr3: 6517626-6517670 | Arabidopsis thaliana |
AT3G18900:five_prime_UTR:3 | 209 | Chr3: 6516972-6517180 | Arabidopsis thaliana |
AT3G18900:five_prime_UTR:5 | 105 | Chr3: 6517566-6517670 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G18900.2 | 2105 | Chr3: 6516891-6519824 |
AT3G18900.1 | 2120 | Chr3: 6516891-6519824 |
AT3G18900.3 | 2064 | Chr3: 6516962-6519846 |
AT3G18900.4 | 2031 | Chr3: 6516972-6519906 |
AT3G18900.5 | 2016 | Chr3: 6516972-6519906 |
AT3G18900.6 | 1602 | Chr3: 6517566-6519824 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G18900:three_prime_UTR:1 | 192 | Chr3: 6519108-6519299 | Arabidopsis thaliana |
AT3G18900:three_prime_UTR:2 | 435 | Chr3: 6519390-6519824 | Arabidopsis thaliana |
AT3G18900:three_prime_UTR:4 | 169 | Chr3: 6519678-6519846 | Arabidopsis thaliana |
AT3G18900:three_prime_UTR:5 | 229 | Chr3: 6519678-6519906 | Arabidopsis thaliana |
AT3G18900:three_prime_UTR:3 | 147 | Chr3: 6519678-6519824 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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