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Gene : AT3G18770 A. thaliana

DB identifier  ? AT3G18770 Secondary Identifier  ? locus:2094024
Brief Description  Autophagy-related protein 13
TAIR Computational Description  Autophagy-related protein 13;(source:Araport11)
TAIR Curator Summary  Autophagy protein.
TAIR Short Description  Autophagy-related protein 13
TAIR Aliases  ATG13B

1 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3286  
Location: Chr3:6459816-6463101 reverse strand

Gene models - AT3G18770 AT3G18770

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
AT13B_ARATH function Involved in autophagy in a nutritional condition dependent manner. The ATG1-ATG13 protein kinase complex regulates downstream events required for autophagosome enclosure and/or vacuolar delivery. Becomes a target of autophagy under nutrient starvation (By similarity). Connects autophagy to plant nutritional status (PubMed:21984698).
AT13B_ARATH similarity Belongs to the ATG13 family. Plant subfamily.

1 Proteins

Function

Gene Ontology

cellular component
Atg1/ULK1 kinase complex  ? ECO  
cytosol  ? ECO  
autophagosome  ? ECO  
phagophore assembly site  ? ECO  
cytoplasmic vesicle  ? ECO  
molecular function
No terms in this category.
biological process
mitophagy  ? ECO  
protein transport  ? ECO  
protein localization to phagophore assembly site  ? ECO  
piecemeal microautophagy of the nucleus  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets