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Gene : AT3G18210 A. thaliana

DB identifier  ? AT3G18210 Secondary Identifier  ? locus:2092727
Brief Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR Computational Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)
TAIR Curator Summary  Belongs to the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteins and contains an oxoglutarate/iron-dependent oxygenase domain (InterPro:IPR005123) of the prolyl 4-hydroxylase, alpha subunit subtype (P4Hc; InterPro:IPR006620), participates in epigenetic repression of flowering genes, works redundantly with ICU11 to repress several members of the MADS-box transcription factors family, during vegetative development via histone modification.
TAIR Short Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR Aliases  CP2

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2704  
Location: Chr3:6237902-6240605 reverse strand

Gene models - AT3G18210 AT3G18210

? Gene models

Transcripts: 2  Exons: 19  Introns: 17 

Overlapping Features

? Genome features that overlap coordinates of this Gene

14 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CP2_ARATH function Participates in the epigenetic repression of flowering genes in association with ICU11 (PubMed:29915151). Functions in the repression of several members of the MADS-box transcription factors family, including SEP3, during vegetative development via histone modification (PubMed:29915151).
CP2_ARATH tissue specificity Expressed in roots, cotyledons, rosette leaves, cauline leaves, inflorescences and siliques.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
nucleoplasm  ? ECO  
molecular function
dioxygenase activity  ? ECO  
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen  ? ECO  
iron ion binding  ? ECO  
L-ascorbic acid binding  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets