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Gene : PAB6 A. thaliana

DB identifier  ? AT3G16380 Secondary Identifier  ? locus:2094922
Name  ? poly(A) binding protein 6 Brief Description  poly(A) binding protein 6
TAIR Computational Description  poly(A) binding protein 6;(source:Araport11)
TAIR Curator Summary  polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins.
TAIR Short Description  poly(A) binding protein 6
TAIR Aliases  PAB6

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2682  
Location: Chr3:5558445-5561126 reverse strand

Gene models - PAB6 AT3G16380

? Gene models

Transcripts: 1  Exons: 7  Introns: 6 

Overlapping Features

? Genome features that overlap coordinates of this Gene

8 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PABP6_ARATH function Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation (By similarity).
PABP6_ARATH similarity Belongs to the polyadenylate-binding protein type-1 family.
PABP6_ARATH tissue specificity Expressed at low levels in leaves and young seedlings.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
RNA binding  ? ECO  
biological process
translational initiation  ? ECO  
mRNA metabolic process  ? ECO  
regulation of translation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets