External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G16260:CDS:2 | 8 | Chr3: 5509785-5509792 | Arabidopsis thaliana |
AT3G16260:CDS:4 | 90 | Chr3: 5509871-5509960 | Arabidopsis thaliana |
AT3G16260:CDS:7 | 191 | Chr3: 5510038-5510228 | Arabidopsis thaliana |
AT3G16260:CDS:9 | 44 | Chr3: 5510323-5510366 | Arabidopsis thaliana |
AT3G16260:CDS:10 | 396 | Chr3: 5510483-5510878 | Arabidopsis thaliana |
AT3G16260:CDS:11 | 266 | Chr3: 5510969-5511234 | Arabidopsis thaliana |
AT3G16260:CDS:12 | 145 | Chr3: 5511318-5511462 | Arabidopsis thaliana |
AT3G16260:CDS:13 | 51 | Chr3: 5511551-5511601 | Arabidopsis thaliana |
AT3G16260:CDS:14 | 993 | Chr3: 5511697-5512689 | Arabidopsis thaliana |
AT3G16260:CDS:15 | 348 | Chr3: 5512771-5513118 | Arabidopsis thaliana |
AT3G16260:CDS:1 | 396 | Chr3: 5509397-5509792 | Arabidopsis thaliana |
AT3G16260:CDS:3 | 90 | Chr3: 5509871-5509960 | Arabidopsis thaliana |
AT3G16260:CDS:6 | 45 | Chr3: 5510038-5510082 | Arabidopsis thaliana |
AT3G16260:CDS:8 | 55 | Chr3: 5510174-5510228 | Arabidopsis thaliana |
AT3G16260:CDS:9.1 | 44 | Chr3: 5510323-5510366 | Arabidopsis thaliana |
AT3G16260:CDS:10.1 | 396 | Chr3: 5510483-5510878 | Arabidopsis thaliana |
AT3G16260:CDS:11.1 | 266 | Chr3: 5510969-5511234 | Arabidopsis thaliana |
AT3G16260:CDS:12.1 | 145 | Chr3: 5511318-5511462 | Arabidopsis thaliana |
AT3G16260:CDS:13.1 | 51 | Chr3: 5511551-5511601 | Arabidopsis thaliana |
AT3G16260:CDS:14.1 | 993 | Chr3: 5511697-5512689 | Arabidopsis thaliana |
AT3G16260:CDS:15.1 | 348 | Chr3: 5512771-5513118 | Arabidopsis thaliana |
AT3G16260:CDS:5 | 75 | Chr3: 5509886-5509960 | Arabidopsis thaliana |
AT3G16260:CDS:6.1 | 45 | Chr3: 5510038-5510082 | Arabidopsis thaliana |
AT3G16260:CDS:8.1 | 55 | Chr3: 5510174-5510228 | Arabidopsis thaliana |
AT3G16260:CDS:9.2 | 44 | Chr3: 5510323-5510366 | Arabidopsis thaliana |
AT3G16260:CDS:10.2 | 396 | Chr3: 5510483-5510878 | Arabidopsis thaliana |
AT3G16260:CDS:11.2 | 266 | Chr3: 5510969-5511234 | Arabidopsis thaliana |
AT3G16260:CDS:12.2 | 145 | Chr3: 5511318-5511462 | Arabidopsis thaliana |
AT3G16260:CDS:13.2 | 51 | Chr3: 5511551-5511601 | Arabidopsis thaliana |
AT3G16260:CDS:14.2 | 993 | Chr3: 5511697-5512689 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G16260:exon:5 | 191 | Chr3: 5510038-5510228 | Arabidopsis thaliana |
AT3G16260:exon:1 | 449 | Chr3: 5509344-5509792 | Arabidopsis thaliana |
AT3G16260:exon:3 | 90 | Chr3: 5509871-5509960 | Arabidopsis thaliana |
AT3G16260:exon:2 | 617 | Chr3: 5509344-5509960 | Arabidopsis thaliana |
AT3G16260:exon:4 | 45 | Chr3: 5510038-5510082 | Arabidopsis thaliana |
AT3G16260:exon:6 | 55 | Chr3: 5510174-5510228 | Arabidopsis thaliana |
AT3G16260:exon:7 | 44 | Chr3: 5510323-5510366 | Arabidopsis thaliana |
AT3G16260:exon:8 | 396 | Chr3: 5510483-5510878 | Arabidopsis thaliana |
AT3G16260:exon:9 | 266 | Chr3: 5510969-5511234 | Arabidopsis thaliana |
AT3G16260:exon:10 | 145 | Chr3: 5511318-5511462 | Arabidopsis thaliana |
AT3G16260:exon:11 | 51 | Chr3: 5511551-5511601 | Arabidopsis thaliana |
AT3G16260:exon:12 | 993 | Chr3: 5511697-5512689 | Arabidopsis thaliana |
AT3G16260:exon:13 | 475 | Chr3: 5512771-5513245 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G16260:five_prime_UTR:2 | 441 | Chr3: 5509344-5509784 | Arabidopsis thaliana |
AT3G16260:five_prime_UTR:1 | 53 | Chr3: 5509344-5509396 | Arabidopsis thaliana |
AT3G16260:five_prime_UTR:3 | 542 | Chr3: 5509344-5509885 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G16260.2 | 3100 | Chr3: 5509344-5513245 |
AT3G16260.1 | 3009 | Chr3: 5509344-5513245 |
AT3G16260.3 | 3087 | Chr3: 5509344-5513245 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G16260:three_prime_UTR:1 | 127 | Chr3: 5513119-5513245 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
RNZ4_ARATH | function | Zinc phosphodiesterase, which displays tRNA 3'-processing endonuclease activity. Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA. Can process the mitochondrial tRNA-like structures (t-elements). |
A0A1I9LSG7_ARATH A0A1I9LSG8_ARATH RNZ4_ARATH | similarity | Belongs to the RNase Z family. |