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Gene : AT3G15460 A. thaliana

DB identifier  ? AT3G15460 Secondary Identifier  ? locus:2090131
Brief Description  Ribosomal RNA processing Brix domain protein
TAIR Computational Description  Ribosomal RNA processing Brix domain protein;(source:Araport11)
TAIR Curator Summary  Encodes one of two Arabidopsis orthologs of yeast BRX1, a protein involved in maturation of the large ribosomal subunit. The proteins are mainly localized in nucleolus. Mutant plants are affected in pre-rRNA processing.
TAIR Short Description  Ribosomal RNA processing Brix domain protein
TAIR Aliases  atBRX1-1

1 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2178  
Location: Chr3:5214084-5216261 reverse strand

Gene models - AT3G15460 AT3G15460

? Gene models

Transcripts: 1  Exons: 8  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BRX11_ARATH function Involved in pre-rRNA processing and required for biogenesis of the large (60S) ribosomal subunit. Required for proper development.
BRX11_ARATH similarity Belongs to the BRX1 family.
BRX11_ARATH subcellular location Associates with 60S pre-ribosomes.
BRX11_ARATH tissue specificity Expressed in roots, rosette leaves, stems, flowers, siliques and seeds.

1 Proteins

Function

Gene Ontology

cellular component
nucleolus  ? ECO  
molecular function
rRNA binding  ? ECO  
biological process
ribosomal large subunit assembly  ? ECO  
rRNA processing  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets