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Gene : AT3G13672 A. thaliana

DB identifier  ? AT3G13672 Secondary Identifier  ? locus:2091581
Brief Description  TRAF-like superfamily protein
TAIR Computational Description  TRAF-like superfamily protein;(source:Araport11)
TAIR Curator Summary  SINAT homolog with truncated RING finger and zinc finger domains.
TAIR Short Description  TRAF-like superfamily protein
TAIR Aliases  SINA2, SINAT6

2 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1817  
Location: Chr3:4472562-4474378 reverse strand

Gene models - AT3G13672 AT3G13672

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SINA6_ARATH function Probable inactive E3 ubiquitin-protein ligase that plays a role in regulation of autophagy. Upon starvation, involved in maintaining ATG6 homeostasis by competitively associating with ATG6, a component of the autophagosome complex (PubMed:28351989). Acts as a positive regulator of drought stress response. Functions as a positive regulator of abscisic acid-mediated stomatal closure (PubMed:24350984).
SINA6_ARATH F4JDF6_ARATH similarity Belongs to the SINA (Seven in absentia) family.
SINA6_ARATH tissue specificity Expressed in roots, rosette leaves, cauline leaves, guard cells and flowers.

2 Proteins

Function

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets