Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 34, Exons: 15, Five Prime UTRs: 3, mRNAs: 4, Three Prime UTRs: 5, Transposable Element: 1, Transposon Fragment: 1
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
F4JDC5_ARATH F4JDC3_ARATH F4JDC2_ARATH | function | Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing. |
ECT2_ARATH | function | Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability (Probable) (PubMed:29618631, PubMed:29716990). M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing (Probable) (PubMed:29618631, PubMed:29716990). Binds preferentially in the 3'UTRs of target genes (PubMed:29716990). May play dual roles in regulating 3'UTR processing in the nucleus and facilitating mRNA stability in the cytoplasm (PubMed:29716990). Required for the correct timing of leaf formation and normal leaf morphology (PubMed:29643069). Functions redundantly with ECT3 (PubMed:29643069). Required for proper trichome branching and morphology (PubMed:29618631, PubMed:29643069, PubMed:29716990). Controls trichome morphology by binding transcripts related to trichome morphogenesis and affecting their stability (PubMed:29618631, PubMed:29716990). |
F4JDC5_ARATH F4JDC3_ARATH F4JDC2_ARATH | similarity | Belongs to the YTHDF family. |
ECT2_ARATH | subcellular location | Localizes to cytoplasmic foci upon drought stress (PubMed:29643069). Relocates to cytoplasmic stress granules upon heat stress (PubMed:29618631). |
ECT2_ARATH | tissue specificity | Expressed in the shoot apex, at the sites of leaf formation, and in emerging leaves (PubMed:29643069). Highly expressed in rapidly developing tissues (PubMed:29716990). |
Function
Gene Ontology
cellular component | |
---|---|
cytosol | ECO |
nucleus | ECO |
cytoplasm | ECO |
molecular function | |
mRNA binding | ECO |
biological process | |
No terms in this category. |
Interactions
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