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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G13225:CDS:10 | 84 | Chr3: 4258928-4259011 | Arabidopsis thaliana |
AT3G13225:CDS:9 | 118 | Chr3: 4259100-4259217 | Arabidopsis thaliana |
AT3G13225:CDS:8 | 164 | Chr3: 4259313-4259476 | Arabidopsis thaliana |
AT3G13225:CDS:7 | 80 | Chr3: 4259564-4259643 | Arabidopsis thaliana |
AT3G13225:CDS:6 | 1199 | Chr3: 4259743-4260941 | Arabidopsis thaliana |
AT3G13225:CDS:4 | 737 | Chr3: 4261058-4261794 | Arabidopsis thaliana |
AT3G13225:CDS:3 | 125 | Chr3: 4261871-4261995 | Arabidopsis thaliana |
AT3G13225:CDS:2 | 87 | Chr3: 4262448-4262534 | Arabidopsis thaliana |
AT3G13225:CDS:1 | 85 | Chr3: 4262769-4262853 | Arabidopsis thaliana |
AT3G13225:CDS:10.1 | 84 | Chr3: 4258928-4259011 | Arabidopsis thaliana |
AT3G13225:CDS:9.1 | 118 | Chr3: 4259100-4259217 | Arabidopsis thaliana |
AT3G13225:CDS:8.1 | 164 | Chr3: 4259313-4259476 | Arabidopsis thaliana |
AT3G13225:CDS:7.1 | 80 | Chr3: 4259564-4259643 | Arabidopsis thaliana |
AT3G13225:CDS:6.1 | 1199 | Chr3: 4259743-4260941 | Arabidopsis thaliana |
AT3G13225:CDS:5 | 671 | Chr3: 4261058-4261728 | Arabidopsis thaliana |
AT3G13225:CDS:10.2 | 84 | Chr3: 4258928-4259011 | Arabidopsis thaliana |
AT3G13225:CDS:9.2 | 118 | Chr3: 4259100-4259217 | Arabidopsis thaliana |
AT3G13225:CDS:8.2 | 164 | Chr3: 4259313-4259476 | Arabidopsis thaliana |
AT3G13225:CDS:7.2 | 80 | Chr3: 4259564-4259643 | Arabidopsis thaliana |
AT3G13225:CDS:6.2 | 1199 | Chr3: 4259743-4260941 | Arabidopsis thaliana |
AT3G13225:CDS:5.1 | 671 | Chr3: 4261058-4261728 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G13225:exon:6 | 125 | Chr3: 4261871-4261995 | Arabidopsis thaliana |
AT3G13225:exon:2 | 87 | Chr3: 4262448-4262534 | Arabidopsis thaliana |
AT3G13225:exon:13 | 345 | Chr3: 4258667-4259011 | Arabidopsis thaliana |
AT3G13225:exon:4 | 664 | Chr3: 4261871-4262534 | Arabidopsis thaliana |
AT3G13225:exon:1 | 148 | Chr3: 4262769-4262916 | Arabidopsis thaliana |
AT3G13225:exon:12 | 266 | Chr3: 4258746-4259011 | Arabidopsis thaliana |
AT3G13225:exon:11 | 118 | Chr3: 4259100-4259217 | Arabidopsis thaliana |
AT3G13225:exon:10 | 164 | Chr3: 4259313-4259476 | Arabidopsis thaliana |
AT3G13225:exon:9 | 80 | Chr3: 4259564-4259643 | Arabidopsis thaliana |
AT3G13225:exon:8 | 1199 | Chr3: 4259743-4260941 | Arabidopsis thaliana |
AT3G13225:exon:7 | 737 | Chr3: 4261058-4261794 | Arabidopsis thaliana |
AT3G13225:exon:5 | 295 | Chr3: 4261871-4262165 | Arabidopsis thaliana |
AT3G13225:exon:3 | 22 | Chr3: 4262234-4262255 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G13225:five_prime_UTR:1 | 63 | Chr3: 4262854-4262916 | Arabidopsis thaliana |
AT3G13225:five_prime_UTR:4 | 664 | Chr3: 4261871-4262534 | Arabidopsis thaliana |
AT3G13225:five_prime_UTR:2 | 148 | Chr3: 4262769-4262916 | Arabidopsis thaliana |
AT3G13225:five_prime_UTR:6 | 66 | Chr3: 4261729-4261794 | Arabidopsis thaliana |
AT3G13225:five_prime_UTR:5 | 295 | Chr3: 4261871-4262165 | Arabidopsis thaliana |
AT3G13225:five_prime_UTR:3 | 22 | Chr3: 4262234-4262255 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G13225.2 | 3003 | Chr3: 4258667-4262916 |
AT3G13225.1 | 3455 | Chr3: 4258667-4262916 |
AT3G13225.3 | 2881 | Chr3: 4258746-4262255 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G13225:three_prime_UTR:2 | 261 | Chr3: 4258667-4258927 | Arabidopsis thaliana |
AT3G13225:three_prime_UTR:1 | 182 | Chr3: 4258746-4258927 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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