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Gene : ALIS1 A. thaliana

DB identifier  ? AT3G12740 Secondary Identifier  ? locus:2087695
Name  ? ALA-interacting subunit 1 Brief Description  ALA-interacting subunit 1
TAIR Computational Description  ALA-interacting subunit 1;(source:Araport11)
TAIR Curator Summary  Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3. The mRNA is cell-to-cell mobile.
TAIR Short Description  ALA-interacting subunit 1
TAIR Aliases  ALIS1

0 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2467  
Location: Chr3:4049309-4051775

Gene models - ALIS1 AT3G12740

? Gene models

Transcripts: 1  Exons: 8  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ALIS1_ARATH function Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.
ALIS1_ARATH similarity Belongs to the CDC50/LEM3 family.
ALIS1_ARATH subcellular location In a heterologous system, the final intracellular localization after exit from the endoplasmic reticulum is the prevacuolar compartment in the presence of ALA2 and the Golgi in the presence of ALA3.
ALIS1_ARATH tissue specificity Expressed in roots, leaves, stems, flowers and siliques. Found in petals and sepals, but not in reproductive tissues. In siliques, detected in the upper part of the seed pod and in the area between the seed pod and the stem, but not in developing seeds. Strong expression in vascular shoot tissues and in stomatal guard cells of young rosettes leaves. In roots, expressed in cells surrounding the xylem and in central and peripheral columella cells.

1 Proteins

Function

Gene Ontology

cellular component
endoplasmic reticulum membrane  ? ECO  
Golgi apparatus  ? ECO  
cytosol  ? ECO  
Golgi membrane  ? ECO  
molecular function
No terms in this category.
biological process
phospholipid transport  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets