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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G12640:CDS:1 | 135 | Chr3: 4014455-4014589 | Arabidopsis thaliana |
AT3G12640:CDS:2 | 101 | Chr3: 4014770-4014870 | Arabidopsis thaliana |
AT3G12640:CDS:4 | 352 | Chr3: 4014952-4015303 | Arabidopsis thaliana |
AT3G12640:CDS:7 | 825 | Chr3: 4015606-4016430 | Arabidopsis thaliana |
AT3G12640:CDS:9 | 55 | Chr3: 4016637-4016691 | Arabidopsis thaliana |
AT3G12640:CDS:10 | 62 | Chr3: 4016845-4016906 | Arabidopsis thaliana |
AT3G12640:CDS:11 | 107 | Chr3: 4017002-4017108 | Arabidopsis thaliana |
AT3G12640:CDS:12 | 88 | Chr3: 4017207-4017294 | Arabidopsis thaliana |
AT3G12640:CDS:13 | 264 | Chr3: 4017412-4017675 | Arabidopsis thaliana |
AT3G12640:CDS:1.1 | 135 | Chr3: 4014455-4014589 | Arabidopsis thaliana |
AT3G12640:CDS:2.1 | 101 | Chr3: 4014770-4014870 | Arabidopsis thaliana |
AT3G12640:CDS:4.1 | 352 | Chr3: 4014952-4015303 | Arabidopsis thaliana |
AT3G12640:CDS:7.1 | 825 | Chr3: 4015606-4016430 | Arabidopsis thaliana |
AT3G12640:CDS:9.1 | 55 | Chr3: 4016637-4016691 | Arabidopsis thaliana |
AT3G12640:CDS:10.1 | 62 | Chr3: 4016845-4016906 | Arabidopsis thaliana |
AT3G12640:CDS:11.1 | 107 | Chr3: 4017002-4017108 | Arabidopsis thaliana |
AT3G12640:CDS:12.1 | 88 | Chr3: 4017207-4017294 | Arabidopsis thaliana |
AT3G12640:CDS:13.1 | 264 | Chr3: 4017412-4017675 | Arabidopsis thaliana |
AT3G12640:CDS:1.2 | 135 | Chr3: 4014455-4014589 | Arabidopsis thaliana |
AT3G12640:CDS:2.2 | 101 | Chr3: 4014770-4014870 | Arabidopsis thaliana |
AT3G12640:CDS:4.2 | 352 | Chr3: 4014952-4015303 | Arabidopsis thaliana |
AT3G12640:CDS:6 | 373 | Chr3: 4015606-4015978 | Arabidopsis thaliana |
AT3G12640:CDS:8 | 356 | Chr3: 4016075-4016430 | Arabidopsis thaliana |
AT3G12640:CDS:9.2 | 55 | Chr3: 4016637-4016691 | Arabidopsis thaliana |
AT3G12640:CDS:10.2 | 62 | Chr3: 4016845-4016906 | Arabidopsis thaliana |
AT3G12640:CDS:11.2 | 107 | Chr3: 4017002-4017108 | Arabidopsis thaliana |
AT3G12640:CDS:12.2 | 88 | Chr3: 4017207-4017294 | Arabidopsis thaliana |
AT3G12640:CDS:13.2 | 264 | Chr3: 4017412-4017675 | Arabidopsis thaliana |
AT3G12640:CDS:1.3 | 135 | Chr3: 4014455-4014589 | Arabidopsis thaliana |
AT3G12640:CDS:2.3 | 101 | Chr3: 4014770-4014870 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G12640:exon:1 | 287 | Chr3: 4014047-4014333 | Arabidopsis thaliana |
AT3G12640:exon:4 | 140 | Chr3: 4014450-4014589 | Arabidopsis thaliana |
AT3G12640:exon:2 | 531 | Chr3: 4014059-4014589 | Arabidopsis thaliana |
AT3G12640:exon:7 | 352 | Chr3: 4014952-4015303 | Arabidopsis thaliana |
AT3G12640:exon:9 | 373 | Chr3: 4015606-4015978 | Arabidopsis thaliana |
AT3G12640:exon:11 | 356 | Chr3: 4016075-4016430 | Arabidopsis thaliana |
AT3G12640:exon:16 | 264 | Chr3: 4017412-4017675 | Arabidopsis thaliana |
AT3G12640:exon:3 | 377 | Chr3: 4014213-4014589 | Arabidopsis thaliana |
AT3G12640:exon:5 | 101 | Chr3: 4014770-4014870 | Arabidopsis thaliana |
AT3G12640:exon:6 | 229 | Chr3: 4014952-4015180 | Arabidopsis thaliana |
AT3G12640:exon:8 | 51 | Chr3: 4015253-4015303 | Arabidopsis thaliana |
AT3G12640:exon:10 | 825 | Chr3: 4015606-4016430 | Arabidopsis thaliana |
AT3G12640:exon:12 | 55 | Chr3: 4016637-4016691 | Arabidopsis thaliana |
AT3G12640:exon:13 | 62 | Chr3: 4016845-4016906 | Arabidopsis thaliana |
AT3G12640:exon:14 | 107 | Chr3: 4017002-4017108 | Arabidopsis thaliana |
AT3G12640:exon:15 | 88 | Chr3: 4017207-4017294 | Arabidopsis thaliana |
AT3G12640:exon:17 | 458 | Chr3: 4017412-4017869 | Arabidopsis thaliana |
AT3G02565:exon:1 | 199 | Chr3: 4017469-4017667 | Arabidopsis thaliana |
AT3G12650:exon:1 | 802 | Chr3: 4017830-4018631 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G12640:five_prime_UTR:1 | 287 | Chr3: 4014047-4014333 | Arabidopsis thaliana |
AT3G12640:five_prime_UTR:4 | 5 | Chr3: 4014450-4014454 | Arabidopsis thaliana |
AT3G12640:five_prime_UTR:2 | 396 | Chr3: 4014059-4014454 | Arabidopsis thaliana |
AT3G12640:five_prime_UTR:3 | 242 | Chr3: 4014213-4014454 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G02565 | AT3G02565 | 199 | Chr3: 4017469-4017667 | A. thaliana | Natural antisense transcript overlaps with AT3G12640;(source:Araport11) | NULL | ||||
AT3G12650 | locus:2101207 | AT3G12650 | 802 | Chr3: 4017830-4018631 | A. thaliana | transmembrane protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G12640.2 | 2281 | Chr3: 4014047-4017675 |
AT3G12640.3 | 2385 | Chr3: 4014059-4017675 |
AT3G12640.4 | 2135 | Chr3: 4014213-4017675 |
AT3G12640.1 | 2353 | Chr3: 4014213-4017869 |
AT3G12650.1 | 802 | Chr3: 4017830-4018631 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G12640:three_prime_UTR:1 | 194 | Chr3: 4017676-4017869 | Arabidopsis thaliana |
AT3G12650:three_prime_UTR:1 | 51 | Chr3: 4017830-4017880 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
poly(A) binding | ECO |
biological process | |
regulation of mRNA stability | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...