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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G12590:CDS:18 | 75 | Chr3: 3996473-3996547 | Arabidopsis thaliana |
AT3G12590:CDS:17 | 69 | Chr3: 3996686-3996754 | Arabidopsis thaliana |
AT3G12590:CDS:16 | 61 | Chr3: 3996865-3996925 | Arabidopsis thaliana |
AT3G12590:CDS:15 | 461 | Chr3: 3997023-3997483 | Arabidopsis thaliana |
AT3G12590:CDS:14 | 618 | Chr3: 3997681-3998298 | Arabidopsis thaliana |
AT3G12590:CDS:13 | 276 | Chr3: 3998418-3998693 | Arabidopsis thaliana |
AT3G12590:CDS:12 | 198 | Chr3: 3998809-3999006 | Arabidopsis thaliana |
AT3G12590:CDS:11 | 111 | Chr3: 3999214-3999324 | Arabidopsis thaliana |
AT3G12590:CDS:10 | 285 | Chr3: 3999409-3999693 | Arabidopsis thaliana |
AT3G12590:CDS:9 | 52 | Chr3: 3999778-3999829 | Arabidopsis thaliana |
AT3G12590:CDS:8 | 180 | Chr3: 3999958-4000137 | Arabidopsis thaliana |
AT3G12590:CDS:7 | 66 | Chr3: 4000556-4000621 | Arabidopsis thaliana |
AT3G12590:CDS:6 | 258 | Chr3: 4001157-4001414 | Arabidopsis thaliana |
AT3G12590:CDS:5 | 489 | Chr3: 4001593-4002081 | Arabidopsis thaliana |
AT3G12590:CDS:4 | 51 | Chr3: 4002365-4002415 | Arabidopsis thaliana |
AT3G12590:CDS:2 | 80 | Chr3: 4002860-4002939 | Arabidopsis thaliana |
AT3G12590:CDS:1 | 225 | Chr3: 4003433-4003657 | Arabidopsis thaliana |
AT3G12590:CDS:18.1 | 75 | Chr3: 3996473-3996547 | Arabidopsis thaliana |
AT3G12590:CDS:17.1 | 69 | Chr3: 3996686-3996754 | Arabidopsis thaliana |
AT3G12590:CDS:16.1 | 61 | Chr3: 3996865-3996925 | Arabidopsis thaliana |
AT3G12590:CDS:15.1 | 461 | Chr3: 3997023-3997483 | Arabidopsis thaliana |
AT3G12590:CDS:14.1 | 618 | Chr3: 3997681-3998298 | Arabidopsis thaliana |
AT3G12590:CDS:13.1 | 276 | Chr3: 3998418-3998693 | Arabidopsis thaliana |
AT3G12590:CDS:12.1 | 198 | Chr3: 3998809-3999006 | Arabidopsis thaliana |
AT3G12590:CDS:11.1 | 111 | Chr3: 3999214-3999324 | Arabidopsis thaliana |
AT3G12590:CDS:10.1 | 285 | Chr3: 3999409-3999693 | Arabidopsis thaliana |
AT3G12590:CDS:9.1 | 52 | Chr3: 3999778-3999829 | Arabidopsis thaliana |
AT3G12590:CDS:8.1 | 180 | Chr3: 3999958-4000137 | Arabidopsis thaliana |
AT3G12590:CDS:7.1 | 66 | Chr3: 4000556-4000621 | Arabidopsis thaliana |
AT3G12590:CDS:6.1 | 258 | Chr3: 4001157-4001414 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G12587:exon:1 | 234 | Chr3: 3995438-3995671 | Arabidopsis thaliana |
AT3G12590:exon:20 | 883 | Chr3: 3995665-3996547 | Arabidopsis thaliana |
AT3G12590:exon:4 | 80 | Chr3: 4002860-4002939 | Arabidopsis thaliana |
AT3G12590:exon:2 | 407 | Chr3: 4003433-4003839 | Arabidopsis thaliana |
AT3G12590:exon:19 | 838 | Chr3: 3995710-3996547 | Arabidopsis thaliana |
AT3G12590:exon:18 | 69 | Chr3: 3996686-3996754 | Arabidopsis thaliana |
AT3G12590:exon:17 | 61 | Chr3: 3996865-3996925 | Arabidopsis thaliana |
AT3G12590:exon:16 | 461 | Chr3: 3997023-3997483 | Arabidopsis thaliana |
AT3G12590:exon:15 | 618 | Chr3: 3997681-3998298 | Arabidopsis thaliana |
AT3G12590:exon:14 | 276 | Chr3: 3998418-3998693 | Arabidopsis thaliana |
AT3G12590:exon:13 | 198 | Chr3: 3998809-3999006 | Arabidopsis thaliana |
AT3G12590:exon:12 | 111 | Chr3: 3999214-3999324 | Arabidopsis thaliana |
AT3G12590:exon:11 | 285 | Chr3: 3999409-3999693 | Arabidopsis thaliana |
AT3G12590:exon:10 | 52 | Chr3: 3999778-3999829 | Arabidopsis thaliana |
AT3G12590:exon:9 | 180 | Chr3: 3999958-4000137 | Arabidopsis thaliana |
AT3G12590:exon:8 | 66 | Chr3: 4000556-4000621 | Arabidopsis thaliana |
AT3G12590:exon:7 | 258 | Chr3: 4001157-4001414 | Arabidopsis thaliana |
AT3G12590:exon:6 | 489 | Chr3: 4001593-4002081 | Arabidopsis thaliana |
AT3G12590:exon:5 | 51 | Chr3: 4002365-4002415 | Arabidopsis thaliana |
AT3G12590:exon:3 | 236 | Chr3: 4002860-4003095 | Arabidopsis thaliana |
AT3G12590:exon:1 | 439 | Chr3: 4003433-4003871 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G12587:five_prime_UTR:1 | 234 | Chr3: 3995438-3995671 | Arabidopsis thaliana |
AT3G12590:five_prime_UTR:1 | 182 | Chr3: 4003658-4003839 | Arabidopsis thaliana |
AT3G12590:five_prime_UTR:3 | 198 | Chr3: 4002898-4003095 | Arabidopsis thaliana |
AT3G12590:five_prime_UTR:2 | 439 | Chr3: 4003433-4003871 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G12587 | locus:4515103057 | AT3G12587 | 1332 | Chr3: 3994340-3995671 | A. thaliana | Oligosaccaryltransferase;(source:Araport11) | NULL | Oligosaccaryltransferase |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G12587.1 | 594 | Chr3: 3994340-3995671 |
AT3G12590.1 | 4545 | Chr3: 3995665-4003839 |
AT3G12590.2 | 4688 | Chr3: 3995710-4003871 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G12590:three_prime_UTR:2 | 808 | Chr3: 3995665-3996472 | Arabidopsis thaliana |
AT3G12590:three_prime_UTR:1 | 763 | Chr3: 3995710-3996472 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...