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Gene : RGTB2 A. thaliana

DB identifier  ? AT3G12070 Secondary Identifier  ? locus:2088614
Name  ? RAB geranylgeranyl transferase beta subunit 2 Brief Description  RAB geranylgeranyl transferase beta subunit 2
TAIR Computational Description  RAB geranylgeranyl transferase beta subunit 2;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  RAB geranylgeranyl transferase beta subunit 2
TAIR Aliases  AtRGTB2, RGTB2

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2815  
Location: Chr3:3844772-3847586 reverse strand

Gene models - RGTB2 AT3G12070

? Gene models

Transcripts: 4  Exons: 38  Introns: 34 

Overlapping Features

? Genome features that overlap coordinates of this Gene

21 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A1I9LTJ2_ARATH function Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX.
PGTB2_ARATH function Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2 (PubMed:26589801). In vitro, can prenylate PGGTI targets with the C-terminal sequence Cys-aliphatic-aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C-terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the beta subunit is associated with the alpha subunit RGTA1 (PubMed:26589801).
PGTB2_ARATH function Required for male fertility and root tip growth.
PGTB2_ARATH A0A1I9LTJ2_ARATH similarity Belongs to the protein prenyltransferase subunit beta family.

2 Proteins

Function

Gene Ontology

cellular component
Rab-protein geranylgeranyltransferase complex  ? ECO  
molecular function
Rab geranylgeranyltransferase activity  ? ECO  
metal ion binding  ? ECO  
biological process
root development  ? ECO  
pollen development  ? ECO  
protein geranylgeranylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets