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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11620:CDS:15 | 144 | Chr3: 3669551-3669694 | Arabidopsis thaliana |
AT3G11620:CDS:13 | 105 | Chr3: 3669785-3669889 | Arabidopsis thaliana |
AT3G11620:CDS:11 | 51 | Chr3: 3670060-3670110 | Arabidopsis thaliana |
AT3G11620:CDS:10 | 148 | Chr3: 3670270-3670417 | Arabidopsis thaliana |
AT3G11620:CDS:9 | 83 | Chr3: 3670509-3670591 | Arabidopsis thaliana |
AT3G11620:CDS:8 | 60 | Chr3: 3670689-3670748 | Arabidopsis thaliana |
AT3G11620:CDS:7 | 51 | Chr3: 3670878-3670928 | Arabidopsis thaliana |
AT3G11620:CDS:6 | 51 | Chr3: 3671035-3671085 | Arabidopsis thaliana |
AT3G11620:CDS:5 | 29 | Chr3: 3671196-3671224 | Arabidopsis thaliana |
AT3G11620:CDS:4 | 72 | Chr3: 3671348-3671419 | Arabidopsis thaliana |
AT3G11620:CDS:3 | 70 | Chr3: 3671501-3671570 | Arabidopsis thaliana |
AT3G11620:CDS:15.1 | 144 | Chr3: 3669551-3669694 | Arabidopsis thaliana |
AT3G11620:CDS:13.1 | 105 | Chr3: 3669785-3669889 | Arabidopsis thaliana |
AT3G11620:CDS:11.1 | 51 | Chr3: 3670060-3670110 | Arabidopsis thaliana |
AT3G11620:CDS:10.1 | 148 | Chr3: 3670270-3670417 | Arabidopsis thaliana |
AT3G11620:CDS:9.1 | 83 | Chr3: 3670509-3670591 | Arabidopsis thaliana |
AT3G11620:CDS:8.1 | 60 | Chr3: 3670689-3670748 | Arabidopsis thaliana |
AT3G11620:CDS:7.1 | 51 | Chr3: 3670878-3670928 | Arabidopsis thaliana |
AT3G11620:CDS:6.1 | 51 | Chr3: 3671035-3671085 | Arabidopsis thaliana |
AT3G11620:CDS:5.1 | 29 | Chr3: 3671196-3671224 | Arabidopsis thaliana |
AT3G11620:CDS:4.1 | 72 | Chr3: 3671348-3671419 | Arabidopsis thaliana |
AT3G11620:CDS:2 | 74 | Chr3: 3671501-3671574 | Arabidopsis thaliana |
AT3G11620:CDS:1 | 71 | Chr3: 3671664-3671734 | Arabidopsis thaliana |
AT3G11620:CDS:12 | 81 | Chr3: 3670030-3670110 | Arabidopsis thaliana |
AT3G11620:CDS:10.2 | 148 | Chr3: 3670270-3670417 | Arabidopsis thaliana |
AT3G11620:CDS:9.2 | 83 | Chr3: 3670509-3670591 | Arabidopsis thaliana |
AT3G11620:CDS:8.2 | 60 | Chr3: 3670689-3670748 | Arabidopsis thaliana |
AT3G11620:CDS:7.2 | 51 | Chr3: 3670878-3670928 | Arabidopsis thaliana |
AT3G11620:CDS:6.2 | 51 | Chr3: 3671035-3671085 | Arabidopsis thaliana |
AT3G11620:CDS:5.2 | 29 | Chr3: 3671196-3671224 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11620:exon:10 | 112 | Chr3: 3671501-3671612 | Arabidopsis thaliana |
AT3G11620:exon:5 | 176 | Chr3: 3671664-3671839 | Arabidopsis thaliana |
AT3G11620:exon:4 | 125 | Chr3: 3671907-3672031 | Arabidopsis thaliana |
AT3G11620:exon:20 | 326 | Chr3: 3669785-3670110 | Arabidopsis thaliana |
AT3G11620:exon:3 | 128 | Chr3: 3671907-3672034 | Arabidopsis thaliana |
AT3G11620:exon:6 | 120 | Chr3: 3671664-3671783 | Arabidopsis thaliana |
AT3G11620:exon:8 | 283 | Chr3: 3671501-3671783 | Arabidopsis thaliana |
AT3G11620:exon:2 | 189 | Chr3: 3671907-3672095 | Arabidopsis thaliana |
AT3G11620:exon:9 | 274 | Chr3: 3671501-3671774 | Arabidopsis thaliana |
AT3G11620:exon:22 | 571 | Chr3: 3669319-3669889 | Arabidopsis thaliana |
AT3G11620:exon:23 | 376 | Chr3: 3669319-3669694 | Arabidopsis thaliana |
AT3G11620:exon:21 | 105 | Chr3: 3669785-3669889 | Arabidopsis thaliana |
AT3G11620:exon:19 | 51 | Chr3: 3670060-3670110 | Arabidopsis thaliana |
AT3G11620:exon:18 | 148 | Chr3: 3670270-3670417 | Arabidopsis thaliana |
AT3G11620:exon:17 | 83 | Chr3: 3670509-3670591 | Arabidopsis thaliana |
AT3G11620:exon:16 | 60 | Chr3: 3670689-3670748 | Arabidopsis thaliana |
AT3G11620:exon:15 | 51 | Chr3: 3670878-3670928 | Arabidopsis thaliana |
AT3G11620:exon:14 | 51 | Chr3: 3671035-3671085 | Arabidopsis thaliana |
AT3G11620:exon:13 | 29 | Chr3: 3671196-3671224 | Arabidopsis thaliana |
AT3G11620:exon:12 | 72 | Chr3: 3671348-3671419 | Arabidopsis thaliana |
AT3G11620:exon:11 | 74 | Chr3: 3671501-3671574 | Arabidopsis thaliana |
AT3G11620:exon:7 | 111 | Chr3: 3671664-3671774 | Arabidopsis thaliana |
AT3G11620:exon:1 | 301 | Chr3: 3671907-3672207 | Arabidopsis thaliana |
AT3G11630:exon:1 | 360 | Chr3: 3672036-3672395 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11620:five_prime_UTR:10 | 42 | Chr3: 3671571-3671612 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:5 | 105 | Chr3: 3671735-3671839 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:4 | 125 | Chr3: 3671907-3672031 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:3 | 128 | Chr3: 3671907-3672034 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:6 | 49 | Chr3: 3671735-3671783 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:8 | 213 | Chr3: 3671571-3671783 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:2 | 189 | Chr3: 3671907-3672095 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:9 | 204 | Chr3: 3671571-3671774 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:7 | 40 | Chr3: 3671735-3671774 | Arabidopsis thaliana |
AT3G11620:five_prime_UTR:1 | 301 | Chr3: 3671907-3672207 | Arabidopsis thaliana |
AT3G11630:five_prime_UTR:1 | 153 | Chr3: 3672036-3672188 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G11630 | locus:2080707 | AT3G11630 | 2124 | Chr3: 3672036-3674159 | A. thaliana | Thioredoxin superfamily protein;(source:Araport11) | Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. Functions in redox cascade with TrxL2 via the ferredoxin-thioredoxin reductase (FTR)/thioredoxin (Trx) pathway to mediate the light-responsive reductive control of target proteins. Continuously transfers reducing power from TrxL2 to H2O2. | Thioredoxin superfamily protein | 2CPA |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G11620.9 | 1138 | Chr3: 3669319-3671612 |
AT3G11620.1 | 1276 | Chr3: 3669319-3671839 |
AT3G11620.3 | 1506 | Chr3: 3669319-3672031 |
AT3G11620.4 | 1518 | Chr3: 3669319-3672034 |
AT3G11620.8 | 1409 | Chr3: 3669319-3672095 |
AT3G11620.7 | 1498 | Chr3: 3669319-3672095 |
AT3G11620.6 | 1601 | Chr3: 3669319-3672207 |
AT3G11620.5 | 1602 | Chr3: 3669319-3672207 |
AT3G11620.2 | 1512 | Chr3: 3669319-3672207 |
AT3G11630.1 | 1176 | Chr3: 3672036-3674159 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G11620:three_prime_UTR:3 | 376 | Chr3: 3669319-3669694 | Arabidopsis thaliana |
AT3G11620:three_prime_UTR:1 | 245 | Chr3: 3669785-3670029 | Arabidopsis thaliana |
AT3G11620:three_prime_UTR:2 | 418 | Chr3: 3669319-3669736 | Arabidopsis thaliana |
AT3G11620:three_prime_UTR:4 | 232 | Chr3: 3669319-3669550 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A178V9X6_ARATH F4J7E1_ARATH A0A384KHB3_ARATH A0A1I9LR49_ARATH | similarity | Belongs to the AB hydrolase superfamily. LDAH family. |
Function
Gene Ontology
cellular component | |
---|---|
lipid droplet | ECO |
molecular function | |
lipase activity | ECO |
biological process | |
lipid storage | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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