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Gene : AT3G11600 A. thaliana

DB identifier  ? AT3G11600 Secondary Identifier  ? locus:2098328
Brief Description  E3 ubiquitin-protein ligase
TAIR Computational Description  E3 ubiquitin-protein ligase;(source:Araport11)
TAIR Curator Summary  One of two plant specific paralogs of unknown function. Interacts with GL2. GIR1/GIR2 loss of function resembles gl2 lof mutations.
TAIR Short Description  NULL
TAIR Aliases  GIR2

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1099  
Location: Chr3:3667205-3668303

Gene models - AT3G11600 AT3G11600

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
GIR2_ARATH function Acts as a negative regulator of root hair development redundantly with GIR1 (PubMed:28526410). GIR1 and GIR2 may function as adapter proteins that associate with GL2 and participate in the control of root hair formation (PubMed:28526410). GIR1 and GIR2 may function as adapter proteins that associate with TPL and participate in the repression of root gene expression (PubMed:28526412).

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
No terms in this category.
biological process
root hair cell development  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets