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Gene : AT3G11580 A. thaliana

DB identifier  ? AT3G11580 Secondary Identifier  ? locus:2080782
Brief Description  AP2/B3-like transcriptional factor family protein
TAIR Computational Description  AP2/B3-like transcriptional factor family protein;(source:Araport11)
TAIR Curator Summary  SOD7 encodes nuclear localized B3 DNA binding domain and a transcriptional repression motif. Belongs to the RAV gene family. Functions in regulation of seed size and binds to and represses KLU. Transcription repressor involved in regulation of inflorescence architecture. Required for axillary meristem formation and acts by repression of CUC2/CUC3.Based on expression patterns, it is not required for stem cell specification during embryo shoot apical meristem initiation.
TAIR Short Description  AP2/B3-like transcriptional factor family protein
TAIR Aliases  NGAL2, SOD7

0 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2825  
Location: Chr3:3648902-3651726 reverse strand

Gene models - AT3G11580 AT3G11580

? Gene models

Transcripts: 5  Exons: 10  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

13 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

3 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
sequence-specific DNA binding  ? ECO  
DNA-binding transcription factor activity  ? ECO  
transcription cis-regulatory region binding  ? ECO  
biological process
regulation of seed growth  ? ECO  
glucosinolate metabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets