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Gene : LGO A. thaliana

DB identifier  ? AT3G10525 Secondary Identifier  ? locus:505006334
Name  ? LOSS OF GIANT CELLS FROM ORGANS Brief Description  LOSS OF GIANT CELLS FROM ORGANS
TAIR Computational Description  LOSS OF GIANT CELLS FROM ORGANS;(source:Araport11)
TAIR Curator Summary  Encodes LGO (loss of giant cells from organs) required for endoreduplication in sepal giant cell formation. Giant cells in both leaves and sepals are absent in lgo mutants. LGO is a member of a plant specific cell cycle inhibitor family SIAMESE and was originally named as SMR1(SIAMESE RELATED 1).
TAIR Short Description  LOSS OF GIANT CELLS FROM ORGANS
TAIR Aliases  LGO, SMR1

3 Gene Rifs

1 Organism

20 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 826  
Location: Chr3:3281306-3282131 reverse strand

Gene models - LGO AT3G10525

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SMR1_ARATH function Probable cyclin-dependent protein kinase (CDK) inhibitor that functions as a repressor of mitosis in the endoreduplication cell cycle (PubMed:17098811, PubMed:26546445). Cooperates with SIM and SMR2 to promote endoreplication during leaf development (PubMed:26546445). Specifically regulates endoreduplication in epidermal pavement cells to produce the cell size pattern (PubMed:20485493). Is necessary for giant cell formation (PubMed:20485493). Positive regulator of effector-triggered immunity (ETI) (PubMed:25455564).
SMR1_ARATH tissue specificity Expressed in roots, leaves, stems, siliques and flowers (PubMed:17098811). Expressed in the root elongation zone (PubMed:24399300).

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
protein kinase inhibitor activity  ? ECO  
biological process
sepal giant cell development  ? ECO  
defense response to bacterium  ? ECO  
positive regulation of DNA endoreduplication  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets