External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G06880:CDS:21 | 18 | Chr3: 2169899-2169916 | Arabidopsis thaliana |
AT3G06880:CDS:18 | 108 | Chr3: 2170640-2170747 | Arabidopsis thaliana |
AT3G06880:CDS:15 | 126 | Chr3: 2170846-2170971 | Arabidopsis thaliana |
AT3G06880:CDS:14 | 147 | Chr3: 2171042-2171188 | Arabidopsis thaliana |
AT3G06880:CDS:13 | 111 | Chr3: 2171273-2171383 | Arabidopsis thaliana |
AT3G06880:CDS:11 | 123 | Chr3: 2171498-2171620 | Arabidopsis thaliana |
AT3G06880:CDS:10 | 132 | Chr3: 2171709-2171840 | Arabidopsis thaliana |
AT3G06880:CDS:9 | 126 | Chr3: 2171926-2172051 | Arabidopsis thaliana |
AT3G06880:CDS:8 | 119 | Chr3: 2172151-2172269 | Arabidopsis thaliana |
AT3G06880:CDS:7 | 295 | Chr3: 2172366-2172660 | Arabidopsis thaliana |
AT3G06880:CDS:6 | 246 | Chr3: 2172734-2172979 | Arabidopsis thaliana |
AT3G06880:CDS:5 | 142 | Chr3: 2173054-2173195 | Arabidopsis thaliana |
AT3G06880:CDS:4 | 1103 | Chr3: 2173263-2174365 | Arabidopsis thaliana |
AT3G06880:CDS:3 | 246 | Chr3: 2174467-2174712 | Arabidopsis thaliana |
AT3G06880:CDS:2 | 67 | Chr3: 2174829-2174895 | Arabidopsis thaliana |
AT3G06880:CDS:1 | 677 | Chr3: 2175010-2175686 | Arabidopsis thaliana |
AT3G06880:CDS:16 | 165 | Chr3: 2170807-2170971 | Arabidopsis thaliana |
AT3G06880:CDS:14.1 | 147 | Chr3: 2171042-2171188 | Arabidopsis thaliana |
AT3G06880:CDS:13.1 | 111 | Chr3: 2171273-2171383 | Arabidopsis thaliana |
AT3G06880:CDS:11.1 | 123 | Chr3: 2171498-2171620 | Arabidopsis thaliana |
AT3G06880:CDS:10.1 | 132 | Chr3: 2171709-2171840 | Arabidopsis thaliana |
AT3G06880:CDS:9.1 | 126 | Chr3: 2171926-2172051 | Arabidopsis thaliana |
AT3G06880:CDS:8.1 | 119 | Chr3: 2172151-2172269 | Arabidopsis thaliana |
AT3G06880:CDS:7.1 | 295 | Chr3: 2172366-2172660 | Arabidopsis thaliana |
AT3G06880:CDS:6.1 | 246 | Chr3: 2172734-2172979 | Arabidopsis thaliana |
AT3G06880:CDS:5.1 | 142 | Chr3: 2173054-2173195 | Arabidopsis thaliana |
AT3G06880:CDS:4.1 | 1103 | Chr3: 2173263-2174365 | Arabidopsis thaliana |
AT3G06880:CDS:3.1 | 246 | Chr3: 2174467-2174712 | Arabidopsis thaliana |
AT3G06880:CDS:2.1 | 67 | Chr3: 2174829-2174895 | Arabidopsis thaliana |
AT3G06880:CDS:1.1 | 677 | Chr3: 2175010-2175686 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G06880:exon:24 | 149 | Chr3: 2169768-2169916 | Arabidopsis thaliana |
AT3G06880:exon:18 | 108 | Chr3: 2170640-2170747 | Arabidopsis thaliana |
AT3G06880:exon:3 | 677 | Chr3: 2175010-2175686 | Arabidopsis thaliana |
AT3G06880:exon:19 | 341 | Chr3: 2170631-2170971 | Arabidopsis thaliana |
AT3G06880:exon:23 | 529 | Chr3: 2170005-2170533 | Arabidopsis thaliana |
AT3G06880:exon:1 | 762 | Chr3: 2175010-2175771 | Arabidopsis thaliana |
AT3G06880:exon:20 | 145 | Chr3: 2170631-2170775 | Arabidopsis thaliana |
AT3G06880:exon:15 | 111 | Chr3: 2171273-2171383 | Arabidopsis thaliana |
AT3G06880:exon:13 | 123 | Chr3: 2171498-2171620 | Arabidopsis thaliana |
AT3G06880:exon:22 | 356 | Chr3: 2170178-2170533 | Arabidopsis thaliana |
AT3G06880:exon:21 | 117 | Chr3: 2170631-2170747 | Arabidopsis thaliana |
AT3G06880:exon:17 | 126 | Chr3: 2170846-2170971 | Arabidopsis thaliana |
AT3G06880:exon:16 | 147 | Chr3: 2171042-2171188 | Arabidopsis thaliana |
AT3G06880:exon:14 | 348 | Chr3: 2171273-2171620 | Arabidopsis thaliana |
AT3G06880:exon:12 | 132 | Chr3: 2171709-2171840 | Arabidopsis thaliana |
AT3G06880:exon:11 | 126 | Chr3: 2171926-2172051 | Arabidopsis thaliana |
AT3G06880:exon:10 | 119 | Chr3: 2172151-2172269 | Arabidopsis thaliana |
AT3G06880:exon:9 | 295 | Chr3: 2172366-2172660 | Arabidopsis thaliana |
AT3G06880:exon:8 | 246 | Chr3: 2172734-2172979 | Arabidopsis thaliana |
AT3G06880:exon:7 | 142 | Chr3: 2173054-2173195 | Arabidopsis thaliana |
AT3G06880:exon:6 | 1103 | Chr3: 2173263-2174365 | Arabidopsis thaliana |
AT3G06880:exon:5 | 246 | Chr3: 2174467-2174712 | Arabidopsis thaliana |
AT3G06880:exon:4 | 67 | Chr3: 2174829-2174895 | Arabidopsis thaliana |
AT3G06880:exon:2 | 751 | Chr3: 2175010-2175760 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G06880:five_prime_UTR:1 | 85 | Chr3: 2175687-2175771 | Arabidopsis thaliana |
AT3G06880:five_prime_UTR:2 | 74 | Chr3: 2175687-2175760 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G06880.1 | 3917 | Chr3: 2169768-2175686 |
AT3G06880.3 | 4489 | Chr3: 2170005-2175771 |
AT3G06880.2 | 4391 | Chr3: 2170005-2175771 |
AT3G06880.5 | 4235 | Chr3: 2170178-2175760 |
AT3G06880.4 | 4321 | Chr3: 2170178-2175760 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G06880:three_prime_UTR:7 | 131 | Chr3: 2169768-2169898 | Arabidopsis thaliana |
AT3G06880:three_prime_UTR:5 | 529 | Chr3: 2170005-2170533 | Arabidopsis thaliana |
AT3G06880:three_prime_UTR:1 | 176 | Chr3: 2170631-2170806 | Arabidopsis thaliana |
AT3G06880:three_prime_UTR:6 | 511 | Chr3: 2170005-2170515 | Arabidopsis thaliana |
AT3G06880:three_prime_UTR:3 | 356 | Chr3: 2170178-2170533 | Arabidopsis thaliana |
AT3G06880:three_prime_UTR:2 | 142 | Chr3: 2170631-2170772 | Arabidopsis thaliana |
AT3G06880:three_prime_UTR:4 | 338 | Chr3: 2170178-2170515 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...