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Gene : SAC3B A. thaliana

DB identifier  ? AT3G06290 Secondary Identifier  ? locus:2082485
Name  ? yeast Sac3 homolog B Brief Description  SAC3/GANP/Nin1/mts3/eIF-3 p25 family
TAIR Computational Description  SAC3/GANP/Nin1/mts3/eIF-3 p25 family;(source:Araport11)
TAIR Curator Summary  Encodes a component of the conserved TREX-2 complex that couples mRNA transcription with nucleo-cytoplasmic export, that is required for prevention of epigenetic gene silencing and has additional roles in regulating siRNAs and DNA methylation.
TAIR Short Description  SAC3/GANP/Nin1/mts3/eIF-3 p25 family
TAIR Aliases  AtSAC3B, SAC3B

2 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 8572  
Location: Chr3:1898877-1907448 reverse strand

Gene models - SAC3B AT3G06290

? Gene models

Transcripts: 4  Exons: 62  Introns: 58 

Overlapping Features

? Genome features that overlap coordinates of this Gene

28 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SAC3B_ARATH function Component of the TREX-2 complex (transcription and export complex 2), a muliprotein complex that functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery (PubMed:19843313).
SAC3B_ARATH similarity Belongs to the SAC3 family.
SAC3B_ARATH subcellular location Apparent concentration to the nuclear periphery.

4 Proteins

Function

Gene Ontology

cellular component
nuclear periphery  ? ECO  
molecular function
No terms in this category.
biological process
No terms in this category.

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets