help  | faq  | software  | BAR
Hide

Oops!

Error: 403

Gene : TBL10 A. thaliana

DB identifier  ? AT3G06080 Secondary Identifier  ? locus:2080389
Name  ? TRICHOME BIREFRINGENCE-LIKE 10 Brief Description  trichome birefringence-like protein (DUF828)
TAIR Computational Description  trichome birefringence-like protein (DUF828);(source:Araport11)
TAIR Curator Summary  Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
TAIR Short Description  Plant protein of unknown function (DUF828)
TAIR Aliases  TBL10

0 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3398  
Location: Chr3:1834591-1837988 reverse strand

Gene models - TBL10 AT3G06080

? Gene models

Transcripts: 2  Exons: 7  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TBL10_ARATH TBL10_ARATH-2 function May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
A0A178VE05_ARATH TBL10_ARATH TBL10_ARATH-2 similarity Belongs to the PC-esterase family. TBL subfamily.

3 Proteins

Function

Gene Ontology

cellular component
membrane  ? ECO  
molecular function
O-acetyltransferase activity  ? ECO  
biological process
circadian rhythm  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets